A Whole-Genome Microarray Study of Arabidopsis thaliana Semisolid Callus Cultures Exposed to Microgravity and Nonmicrogravity Related Spaceflight Conditions for 5 Days on Board of Shenzhou 8
Table 3
Differentially (at least 2-fold) and significantly expressed genes (, 573 in total) that are identical between flight space (FS) as well as in-flight centrifugation (FC) compared to ground static (GS). Changes are due to nonmicrogravity related spaceflight conditions. The genes are sorted according to the overrepresented biological processes identified by GSEA to be most prominent.
No
ATG number
Gene name/description
( value) FS versus GS
( value) FC versus GS
Biological process
1
AT1G01560
MAP kinase 11
1.83 (0.034)
2.13 (0.027)
MAPK cascade
2
AT1G73500
MAP kinase 9
1.34 (0.006)
1.37 (0.038)
MAPK cascade
3
AT3G01830
Calcium-binding EF-hand family protein
1.3 (0.032)
1.85 (0.027)
MAPK cascade
4
AT3G47480
Calcium-binding EF-hand family protein
1.24 (0.081)
1.87 (0.037)
MAPK cascade
5
AT2G40750
WRKY DNA-binding transcription factor 54
1.29 (0.008)
1.74 (0.006)
MAPK cascade
6
AT3G56400
WRKY DNA-binding transcription factor 70
1.85 (0.008)
2.19 (0.004)
MAPK cascade
7
AT5G22570
WRKY DNA-binding transcription factor 38
2.52 (0.006)
3.28 (0.004)
MAPK cascade
8
AT3G15500
NAC-domain containing transcription factor 3
2.98 ()
2.63 (0.003)
MAPK cascade
9
AT1G35670
Calcium-dependent calmodulin-independent protein kinase 2
1.2 (0.002)
1.23 (0.003)
Protein phosphorylation
10
AT1G20650
Serine/threonine protein kinase superfamily protein
−1.4 (0.024)
−1.5 (0.018)
Protein phosphorylation
11
AT3G61160
Serine/threonine protein kinase family protein
−1.22 (0.007)
−1.4 (0.008)
Protein phosphorylation
12
AT1G78290
Serine/threonine protein kinase family protein 2C
1.71 (0.019)
2.0 (0.034)
Protein phosphorylation
13
AT4G18640
Serine/threonine protein kinase family protein
1.08 (0.019)
1.07 (0.014)
Protein phosphorylation
14
AT4G18950
Serine/threonine/tyrosine protein kinase family protein
2.53 (0.031)
3.17 (0.02)
Protein phosphorylation
15
AT5G16900
Leucine-rich repeat protein kinase family protein
1.42 (0.023)
2.0 (0.012)
Protein phosphorylation
16
AT1G51890
Leucine-rich repeat protein kinase family protein
2.55 (0.05)
2.64 (0.047)
Protein phosphorylation
17
AT4G11480
Cysteine-rich receptor-like protein kinase family protein
1.56 (0.05)
1.89 (0.033)
Protein phosphorylation
18
AT4G23260
Cysteine-rich receptor-like protein kinase family protein
1.65 (0.068)
2.49 (0.041)
Protein phosphorylation
19
AT4G38470
Tyrosine kinase family protein 46
1.14 (0.008)
1.34 (0.015)
Protein phosphorylation
20
AT1G69790
Protein kinase superfamily protein
1.19 (0.038)
1.12 (0.009)
Protein phosphorylation
21
AT5G53450
Protein kinase
1.88 (0.088)
1.89 (0.075)
Protein phosphorylation
22
AT1G51620
Protein kinase family protein
1.8 (0.052)
2.31 (0.048)
Protein phosphorylation
23
AT3G04530
Phosphoenolpyruvate carboxylase kinase 2
−1.6 (0.06)
−1.19 (0.43)
Protein phosphorylation
24
AT5G63650
Protein kinase 2.5
−1.26 (0.028)
−1.01 (0.032)
Protein phosphorylation
25
AT1G16260
Cell-wall associated protein kinase family protein
1.73 (0.006)
2.13 (0.003)
Protein phosphorylation
26
AT1G68690
Proline-rich extension-like receptor kinase family protein
1.04 (0.002)
1.03 (0.04)
Protein phosphorylation
27
AT5G46330
Flagellin 2-induced receptor-like kinase
−1.85 (0.043)
−2.38 (0.016)
Defense response
28
AT2G19190
Flagellin 22-induced receptor-like kinase
2.48 (0.065)
2.27 (0.075)
Defense response
29
AT2G15120
Disease-resistance family protein
2.68 (0.035)
2.53 (0.04)
Defense response
30
AT1G59780
Disease resistance protein
1.37 (0.092)
1.98 (0.052)
Defense response
31
AT1G63880
Disease resistance protein
−1.81 (0.003)
−1.79 (0.016)
Defense response
32
AT2G39200
Transmembrane domain-containing protein, similar to mildew resistance protein 12
