Predicting Homogeneous Pilus Structure from Monomeric Data and Sparse Constraints

Figure 2

RMSD landscapes from the native structure (for the GC pilus) or the structure with the lowest energy in the largest cluster (for the TCP and PulG pilus) versus energy scores. The grey plots and the boxes show the distributions of RMSDs for all the models from each calculation, and the dark cyan plots show the distribution of cluster 1 (the largest cluster). (a) The GC pilus with 4 distance constraints, (b) the GC pilus with no distance constraints, (c) the GC pilus with 2 distance constraints, (d) the GC pilus with 6 distance constraints, (e) the PulG pseudopilus with no distance constraints, and (f) the TCP with no distance constraints.

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