A Shortest Dependency Path Based Convolutional Neural Network for Protein-Protein Relation Extraction

Figure 2

The dependency parsing result of sentence “Acanthamoeba profilin affects the mechanical properties of non-filamentous actin.” The words in blue are the two target proteins, and the sdp between the proteins is represented by the red arrows. Tags such as “nsubj” and “dobj” are the dependency relations between two words.