BioMed Research International

Application of Systems Biology and Bioinformatics Methods in Biochemistry and Biomedicine


Publishing date
04 Oct 2013
Status
Published
Submission deadline
17 May 2013

Lead Editor
Guest Editors

1Institute of Systems Biology, Shanghai University, Shanghai 200444, China

2Department of Genetics and Genomics Sciences, Mount Sinai School of Medicine, New York, NY, USA

3College of Information Engineering, Shanghai Maritime University, Shanghai, China


Application of Systems Biology and Bioinformatics Methods in Biochemistry and Biomedicine

Description

With the accomplishment of human genome sequencing, the number of sequence-known proteins has increased explosively; it is highly desired to develop effective computational methods and tools that can mine useful information to support the development of biochemistry, biomedicine, and drug design. Furthermore, in order to understand the protein-protein, protein-D/RNA, and other complex interactions, systems biology approaches are applied.

Meanwhile, the next-generation sequencing techniques and the high-throughput systems for measuring biomedical data have created the challenge to analyze the large-scale complicated experimental data. It is also highly demanded to develop and apply the advanced bioinformatics and systems biology approaches and tools for processing these sorts of datasets. We invite investigators to contribute research articles or review articles in these areas. Potential topics include, but are not limited to:

  • Various powerful methods, analyzers, and predictors for identifying protein attributes such as subcellular locations and functional class
  • Protein function regions and sites prediction
  • Posttranslation modification analysis and prediction
  • Protein-protein, protein-D/RNA, protein-ligand, and D/RNA-ligand interactions
  • Disease gene finding based on biology pathways and networks
  • Analysis of the different stages of disease using systems biology approaches
  • Gene network analysis and prediction of disease recurrence using bioinformatics and systems biology
  • The analysis and prediction of drug's target disease, drug side-effect, combination and toxicity based on systems biology
  • The novel methods in SAR/QSAR or 3D-SA/QSAR study

Before submission authors should carefully read over the journal's Author Guidelines, which are located at http://www.hindawi.com/journals/bmri/guidelines/. Prospective authors should submit an electronic copy of their complete manuscript through the journal Manuscript Tracking System at http://mts.hindawi.com/submit/journals/bmri/bioinformatics/asbb/ according to the following timetable:


Articles

  • Special Issue
  • - Volume 2013
  • - Article ID 651968
  • - Editorial

Application of Systems Biology and Bioinformatics Methods in Biochemistry and Biomedicine

Yudong Cai | Tao Huang | ... | Bin Niu
  • Special Issue
  • - Volume 2013
  • - Article ID 502827
  • - Research Article

ASPic-GeneID: A Lightweight Pipeline for Gene Prediction and Alternative Isoforms Detection

Tyler Alioto | Ernesto Picardi | ... | Graziano Pesole
  • Special Issue
  • - Volume 2013
  • - Article ID 505864
  • - Research Article

Systems Approaches to Modeling Chronic Mucosal Inflammation

Mridul Kalita | Bing Tian | ... | Allan R. Brasier
  • Special Issue
  • - Volume 2013
  • - Article ID 512086
  • - Research Article

Systems Approaches Evaluating the Perturbation of Xenobiotic Metabolism in Response to Cigarette Smoke Exposure in Nasal and Bronchial Tissues

Anita R. Iskandar | Florian Martin | ... | Manuel C. Peitsch
  • Special Issue
  • - Volume 2013
  • - Article ID 409658
  • - Research Article

An Accurate Method for Prediction of Protein-Ligand Binding Site on Protein Surface Using SVM and Statistical Depth Function

Kui Wang | Jianzhao Gao | ... | Gang Hu
  • Special Issue
  • - Volume 2013
  • - Article ID 687607
  • - Research Article

Computer-Assisted System with Multiple Feature Fused Support Vector Machine for Sperm Morphology Diagnosis

Kuo-Kun Tseng | Yifan Li | ... | Mingyue Ding
  • Special Issue
  • - Volume 2013
  • - Article ID 742835
  • - Review Article

Advanced Systems Biology Methods in Drug Discovery and Translational Biomedicine

Jun Zou | Ming-Wu Zheng | ... | Zhi-Guang Su
  • Special Issue
  • - Volume 2013
  • - Article ID 795676
  • - Research Article

Study of MicroRNAs Related to the Liver Regeneration of the Whitespotted Bamboo Shark, Chiloscyllium plagiosum

Conger Lu | Jie Zhang | ... | Zhengbing Lv
  • Special Issue
  • - Volume 2013
  • - Article ID 485034
  • - Research Article

Predicting Drugs Side Effects Based on Chemical-Chemical Interactions and Protein-Chemical Interactions

Lei Chen | Tao Huang | ... | Kuo-Chen Chou
  • Special Issue
  • - Volume 2013
  • - Article ID 401649
  • - Research Article

Network-Based Inference Framework for Identifying Cancer Genes from Gene Expression Data

Bo Yang | Junying Zhang | ... | Yuanyuan Zhang
BioMed Research International
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Acceptance rate8%
Submission to final decision110 days
Acceptance to publication24 days
CiteScore5.300
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