Research Article

Calculated Vibrational Properties of Ubisemiquinones

Table 2

Calculated vibrational frequencies (in cm−1), intensities (in km/mol), Raman activities (in Å4/amu), and potential energy distributions (%) of normal modes that contain contributions from C O and/or C C groups (R3, R9, R4, and R10) of unlabeled, 13C-, and 18O-labeled in (a) the gas phase and (b) CCl4. Only contributions to the PED above 5% are considered. Frequencies are scaled by a factor 0.9808. For 18O isotope labeling only the carbonyl oxygen atoms are labeled. Ri = ith bond stretching; δCi = X– –X bending for –CH3, –CH2– and –CH= groups; X = atom bonded to ; RD1 = 6−1/2(α1 − α2 + α3 − α4 + α5 − α6); RD2 = 12−1/2(2α1 − α2 − α3 + 2α4 − α5 − α6) = ring deformation; α i = angle bending of ring atoms.
(a) Gas phase

IRRamanPotential energy distribution

Unlabeled

1448945R1(6) − R6(5) + δC8(26) + δC9(25)
14611610R3(9) − R10(5) + δC10(26) + δC7(31) + δC9(8)
149533247R9(34) + R3(22) − R10(10) + δC7(8)
15002873R3(29) − R9(27) + RD(9) + δC14(9)
15243021R4(33) − R10(16) − R5(6) − R7(6) + δC7(6)
16089451R4(26) + R10(23) + RD(12)

13C

1419723δC9(29) + δC8(22) + R4(12) − R10(11) + R3(6)
14302186δC8(35) − R3(20) + R9(8) + δC9(7)
1443647δC9(38) − R3(14) + R10(14) + δC7(7) − R9(6)
14581361R3(14) − R4(12) + δC9(10) + δC8(9) + R9(8) + δC7(6) + R10(6)
145919525R9(34) + δC8(22) + δC9(6) − RD1(6) − R10(5)
14748130δC8(32) + δC7(14) − R9(11) + δC9(20) − R3(6)
14812323δC14(37) + δC10(20) + δC13(13) + R3(7)
15193418δC7(33) − R4(15) + δC14(12) + δC13(5)
15507384R4(23) + R10(22) + RD2(11)

18O

144516011δC8(22) − R3(14) + δC9(12) + R1(8) − R6(6)
14551153R3(22) + δC9(21) + δC10(12) + δC7(8) − R10(6) + R9(5)
14661033δC14(24) + δC7(18) + δC13(16) + δC10(7) − R9(6)
14662717δC13(20) + δC7(19) + δC14(19) + R9(9)
1479108115R9(37) + δC8(28)
14826246δC7(41) − R3(12) + δC14(5)
14864633δC13(57) + δC14(10) − R3(8)
1488287δC10(28) + δC13(23) + δC14(17) − R3(10)
15222112R4(31) − R10(20) + δC7(8) − R5(6) − R7(5)
160710432R4(27) + R10(24) + RD2(11)

(b) CCl4

IRRamanPotential energy distribution

Unlabeled

14501346R3(5) − R1(5) + R6(5) + δC8(29) + δC9(23)
14601711R3(9) + δC10(28) + δC7(27) + δC9(9)
1491184328R9(56) − R10(8)
1495238163R3(46) + δC13(14) + RD1(6) + δC7(5) + δC9(5)
15233627R4(32) − R10(17) − R5(6) − R7(6) + δC7(6)
160711869R4(27) + R10(23) + RD2(12)

13C

13855133δC7(79) + R11(7) + R9(5)
14212142δC9(28) + δC8(18) − R10(13) + R4(11) + R3(9)
14313657δC8(32) − R3(24) + R9(11)
14431591δC9(39) + R10(14) − R9(12) − R3(11) + δC7(6)
145424348R9(32) + δC8(27) + δC9(12) − RD1(6)
145817156R3(15) − R4(11) + δC9(8) + δC8(8) + R9(7) + R10(6) + δC7(12)
14747190δC9(38) + δC8(23) + δC7(11) − R3(6) − R9(6)
14792734δC13(39) + δC10(19) + δC14(14) + R3(6)
14873916δC7(28) + δC13(24) − R4(13) + δC14(5)
15499752R4(24) + R10(22) + RD2(11)

18O

144625919δC8(22) − R3(20) + R1(8) + δC9(6) − R6(6)
14559101δC9(24) − R3(17) + δC10(10) + R9(9) + δC7(8) + R10(6)
146597131R9(27) + δC7(18) + δC8(19)
1476112112δC8(49) − R9(23)
148155134δC7(41) − R3(14) + δC9(10)
14835249δC14(52) + δC13(18) − R3(7)
1521269R4(30) − R10(21) + δC7(8) − R5(6) − R7(6)
160612828R4(28) + R10(24) + RD2(11)