Comparative and Functional Genomics
Volume 2009 (2009), Article ID 820381, 13 pages
doi:10.1155/2009/820381
Research Article

A Comprehensive Bioinformatics Analysis of the Nudix Superfamily in Arabidopsis thaliana

D. Gunawardana,1,2 V. A. Likic,1 and K. R. Gayler1

1Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria 3010, Australia
2School of Biological Sciences, University of Sydney, New South Wales 2006, Australia

Received 15 October 2008; Accepted 16 April 2009

Academic Editor: H. Heng

Copyright © 2009 D. Gunawardana et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Supplementary Material

Supplement Table A presenrs:

Matrix of CLUSTALW scores from pairwise sequence alignment. Boxes where >30% sequence identity was detected by CLUSTALW alignment are colored in orange.

Supplement Figure A presenrs:

Sequence alignment of ApnA hydrolases from plants.

The protein products of the Arabidopsis genes At1g30110, At3g10620 and At5g06340 and their counterparts from Lupinus angustifolius (gi:1888557), Oryza sativa (gi:50929793) and Hordeum vulgare (gi:2564253) are aligned using the CLUSTAL W algorithm. Motif 4 present only in the At1g30110 gene product is underlined in red. The N-terminal extensions forming putative preprotein sequences in all proteins excluding the At1g30110 gene product are underlined in green.

  1. Supplementary Material