Robust Joint Analysis with Data Fusion in Two-Stage Quantitative Trait Genome-Wide Association Studies

Table 2

Power comparison (𝑛=2000,𝛾=2×10⁻⁴,𝛼=0.05,  and 𝑚=5×10⁵).

𝜋	MAF	REC		ADD		DOM
		AFJ	MAXFJ	AFJ	MAXFJ	AFJ	MAXFJ
0.30	0.15	1.3𝑒−4	0.006	0.489	0.426	0.676	0.681
	0.30	0.066	0.340	0.852	0.806	0.754	0.828
	0.45	0.556	0.833	0.922	0.891	0.516	0.706
0.40	0.15	1.2𝑒−4	0.011	0.709	0.651	0.866	0.876
	0.30	0.101	0.529	0.961	0.943	0.916	0.956
	0.45	0.765	0.957	0.987	0.979	0.732	0.892
0.50	0.15	1.7𝑒−4	0.012	0.838	0.793	0.951	0.958
	0.30	0.133	0.683	0.992	0.987	0.975	0.991
	0.45	0.888	0.992	0.998	0.997	0.860	0.967