Nucleoside triphosphate metabolic process GO:0009141
24
Ribonucleoside metabolic process GO:0009119
25
“Minitrim”
#2-#0 (103)
Negative regulation of RNA metabolic process GO:0051253
25
Regulation of RNA metabolic process GO:0051252
45
Negative regulation of gene expression GO:0010629
25
Gene expression GO:0010467
60
Negative regulation of biosynthetic process GO:0009890
26
Regulation of transcription, DNA-templated GO:0006355
42
#0-#2 (141)
DNA-dependent DNA replication GO:0006261
7
DNA replication GO:0006260
9
DNA metabolic GO:0006259
17
Cellular response to DNA damage stimulus GO:0000278
13
Replication fork GO:0005657
5
DNA repair GO:0006281
10
“Reversion”
#9-#2 (59)
Spindle organization GO:0007051
7
Mitotic cell cycle GO:0000278
13
Cell division GO:0051301
14
Cell cycle GO:0007049
16
Nuclear division GO:0000280
12
Regulation of nuclear division GO:0051783
5
Mitosis GO:0007067
10
Regulation of cell cycle GO:0051726
10
Cell cycle process GO:0022402
15
Regulation of mitotic cell cycle GO:0007346
7
#12-#5 (135)
Mitochondrion GO:0005739
24
The number of overlapped genes of each “invariant,” “minitrim,” and “reversion” profile pairs is listed in the bracket below the name of each profile pairs in this table.