- About this Journal
- Abstracting and Indexing
- Aims and Scope
- Article Processing Charges
- Articles in Press
- Author Guidelines
- Bibliographic Information
- Citations to this Journal
- Contact Information
- Editorial Board
- Editorial Workflow
- Free eTOC Alerts
- Publication Ethics
- Reviewers Acknowledgment
- Submit a Manuscript
- Subscription Information
- Table of Contents
Genetics Research International
Volume 2011 (2011), Article ID 579308, 6 pages
Origins of the Domestic Dog and the Rich Potential for Gene Mapping
1School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia
2 Clive and Vera Ramaciotti Centre for Gene Function Analysis, University of New South Wales, Sydney, NSW 2052, Australia
3National Center for Genetic Engineering and Biotechnology, 113 Phahonyothin Road Klong 1, Klong Luang, Pathumthani 12120, Thailand
Received 25 June 2010; Revised 30 September 2010; Accepted 5 November 2010
Academic Editor: Tomaso Patarnello
Copyright © 2011 Jeremy R. Shearman and Alan N. Wilton. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
- C. Vilà, P. Savolainen, J. E. Maldonado et al., “Multiple and ancient origins of the domestic dog,” Science, vol. 276, no. 5319, pp. 1687–1689, 1997.
- R. K. Wayne and E. A. Ostrander, “Origin, genetic diversity, and genome structure of the domestic dog,” BioEssays, vol. 21, no. 3, pp. 247–257, 1999.
- P. Savolainen, Y. P. Zhang, J. Luo, J. Lundeberg, and T. Leitner, “Genetic evidence for an East Asian origin of domestic dogs,” Science, vol. 298, no. 5598, pp. 1610–1613, 2002.
- J. F. Pang, C. Kluetsch, X. J. Zou et al., “MtDNA data indicate a single origin for dogs south of yangtze river, less than 16,300 years ago, from numerous wolves,” Molecular Biology and Evolution, vol. 26, no. 12, pp. 2849–2864, 2009.
- M. Germonpré, M. V. Sablin, R. E. Stevens et al., “Fossil dogs and wolves from Palaeolithic sites in Belgium, the Ukraine and Russia: osteometry, ancient DNA and stable isotopes,” Journal of Archaeological Science, vol. 36, no. 2, pp. 473–490, 2009.
- T. M. Anderson, B. M. vonHoldt, S. I. Candille et al., “Molecular and evolutionary history of melanism in Norths American gray wolves,” Science, vol. 323, no. 5919, pp. 1339–1343, 2009.
- F. Verginelli, C. Capelli, V. Coia et al., “Mitochondrial DNA from prehistoric canids highlights relationships between dogs and South-East European wolves,” Molecular Biology and Evolution, vol. 22, no. 12, pp. 2541–2551, 2005.
- A. R. Boyko, R. H. Boyko, C. M. Boyko et al., “Complex population structure in African village dogs and its implications for inferring dog domestication history,” Proceedings of the National Academy of Sciences of the United States of America, vol. 106, no. 33, pp. 13903–13908, 2009.
- B. M. vonHoldt, J. P. Pollinger, K. E. Lohmueller et al., “Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication,” Nature, vol. 464, no. 7290, pp. 898–902, 2010.
- H. G. Parker, A. V. Kukekova, D. T. Akey et al., “Breed relationships facilitate fine-mapping studies: a 7.8-kb deletion cosegregates with Collie eye anomaly across multiple dog breeds,” Genome Research, vol. 17, no. 11, pp. 1562–1571, 2007.
- H. G. Parker, L. V. Kim, N. B. Sutter et al., “Genetic structure of the purebred domestic domestic dog,” Science, vol. 304, no. 5674, pp. 1160–1164, 2004.
- K. Lindblad-Toh, C. M. Wade, T. S. Mikkelsen et al., “Genome sequence, comparative analysis and haplotype structure of the domestic dog,” Nature, vol. 438, no. 7069, pp. 803–819, 2005.
- T. C. Spady and E. A. Ostrander, “Canine behavioral genetics: pointing out the phenotypes and herding up the genes,” American Journal of Human Genetics, vol. 82, no. 1, pp. 10–18, 2008.
- F. C. F. Calboli, J. Sampson, N. Fretwell, and D. J. Balding, “Population structure and inbreeding from pedigree analysis of purebred dogs,” Genetics, vol. 179, no. 1, pp. 593–601, 2008.
- J. D. Wall and J. K. Pritchard, “Haplotype blocks and linkage disequilibrium in the human genome,” Nature Reviews Genetics, vol. 4, no. 8, pp. 587–597, 2003.
- M. M. Gray, J. M. Granka, C. D. Bustamante et al., “Linkage disequilibrium and demographic history of wild and domestic canids,” Genetics, vol. 181, no. 4, pp. 1493–1505, 2009.
- J. M. Akey, A. L. Ruhe, D. T. Akey et al., “Tracking footprints of artificial selection in the dog genome,” Proceedings of the National Academy of Sciences of the United States of America, vol. 107, no. 3, pp. 1160–1165, 2010.
- E. K. Karlsson, I. Baranowska, C. M. Wade et al., “Efficient mapping of mendelian traits in dogs through genome-wide association,” Nature Genetics, vol. 39, no. 11, pp. 1321–1328, 2007.
- E. Cadieu, M. W. Neff, P. Quignon et al., “Coat variation in the domestic dog is governed by variants in three genes,” Science, vol. 326, no. 5949, pp. 150–153, 2009.
- E. F. Kirkness, V. Bafna, A. L. Halpern et al., “The dog genome: survey sequencing and comparative analysis,” Science, vol. 301, no. 5641, pp. 1898–1903, 2003.
- A. K. Wong, A. L. Ruhe, B. L. Dumont et al., “A comprehensive linkage map of the dog genome,” Genetics, vol. 184, no. 2, pp. 595–605, 2010.
- M. L. Metzker, “Sequencing technologies—the next generation,” Nature Reviews. Genetics, vol. 11, pp. 31–46, 2009.
- T. J. Albert, M. N. Molla, D. M. Muzny et al., “Direct selection of human genomic loci by microarray hybridization,” Nature Methods, vol. 4, no. 11, pp. 903–905, 2007.
- A. Gnirke, A. Melnikov, J. Maguire et al., “Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing,” Nature Biotechnology, vol. 27, no. 2, pp. 182–189, 2009.
- R. Tewhey, J. B. Warner, M. Nakano et al., “Microdroplet-based PCR enrichment for large-scale targeted sequencing,” Nature Biotechnology, vol. 27, no. 11, pp. 1025–1031, 2009.
- D. R. Sargan, “IDID: inherited diseases in dogs: web-based information for canine inherited disease genetics,” Mammalian Genome, vol. 15, no. 6, pp. 503–506, 2004.
- J. J. Lee, C. Larsson, W. O. Lui, A. Höög, and H. Von Euler, “A dog pedigree with familial medullary thyroid cancer,” International Journal of Oncology, vol. 29, no. 5, pp. 1173–1182, 2006.
- M. Pastor, K. Chalvet-Monfray, T. Marchal et al., “Genetic and environmental risk indicators in canine non-Hodgkin's lymphomas: breed associations and geographic distribution of 608 cases diagnosed throughout France over 1 year,” Journal of Veterinary Internal Medicine, vol. 23, no. 2, pp. 301–310, 2009.
- P. J. Rivera, M. Melin, T. Biagi et al., “Mammary tumor development in dogs is associated with BRCA1 and BRCA2,” Cancer Research, vol. 69, no. 22, pp. 8770–8774, 2009.
- G. T. Selvarajah, J. Kirpensteijn, M. E. van Wolferen, N. A. S. Rao, H. Fieten, and J. A. Mol, “Gene expression profiling of canine osteosarcoma reveals genes associated with short and long survival times,” Molecular Cancer, vol. 8, article 72, 2009.
- J. Tang, S. Le, L. Sun et al., “Copy number abnormalities in sporadic canine colorectal cancers,” Genome Research, vol. 20, no. 3, pp. 341–350, 2010.
- B. A. Tamburini, S. Trapp, T. L. Phang, J. T. Schappa, L. E. Hunter, and J. F. Modiano, “Gene expression profiles of sporadic canine hemangiosarcoma are uniquely associated with breed,” PLoS ONE, vol. 4, no. 5, Article ID e5549, 2009.
- R. Thomas, H. J. Wang, P. C. Tsai et al., “Influence of genetic background on tumor karyotypes: evidence for breed-associated cytogenetic aberrations in canine appendicular osteosarcoma,” Chromosome Research, vol. 17, no. 3, pp. 365–377, 2009.
- M. W. S. Martin, M. J. Stafford Johnson, and B. Celona, “Canine dilated cardiomyopathy: a retrospective study of signalment, presentation and clinical findings in 369 cases,” Journal of Small Animal Practice, vol. 50, no. 1, pp. 23–29, 2009.
- L. J. Gershwin, “Autoimmune diseases in small animals,” Veterinary Clinics of North America—Small Animal Practice, vol. 40, no. 3, pp. 439–457, 2010.
- L. Lin, J. Faraco, R. Li et al., “The sleep disorder canine narcolepsy is caused by a mutation in the hypocretin (orexin) receptor 2 gene,” Cell, vol. 98, no. 3, pp. 365–376, 1999.
- M. Hungs, L. Lin, M. Okun, and E. Mignot, “Polymorphisms in the vicinity of the hypocretin/orexin are not associated with human narcolepsy,” Neurology, vol. 57, no. 10, pp. 1893–1895, 2001.
- B. Zangerl, O. Goldstein, A. R. Philp et al., “Identical mutation in a novel retinal gene causes progressive rod-cone degeneration in dogs and retinitis pigmentosa in humans,” Genomics, vol. 88, no. 5, pp. 551–563, 2006.
- N. H. C. Salmon Hillbertz, M. Isaksson, E. K. Karlsson et al., “Duplication of FGF3, FGF4, FGF19 and ORAOV1 causes hair ridge and predisposition to dermoid sinus in Ridgeback dogs,” Nature Genetics, vol. 39, no. 11, pp. 1318–1320, 2007.
- M. Wilbe, P. Jokinen, K. Truvé et al., “Genome-wide association mapping identifies multiple loci for a canine SLE-related disease complex,” Nature Genetics, vol. 42, no. 3, pp. 250–254, 2010.
- N. B. Sutter, D. S. Mosher, M. M. Gray, and E. A. Ostrander, “Morphometrics within dog breeds are highly reproducible and dispute rensch's rule,” Mammalian Genome, vol. 19, no. 10-12, pp. 713–723, 2008.
- B. D. Rodgers and D. K. Garikipati, “Clinical, agricultural, and evolutionary biology of myostatin: a comparative review,” Endocrine Reviews, vol. 29, no. 5, pp. 513–534, 2008.
- D. S. Mosher, P. Quignon, C. D. Bustamante et al., “A mutation in the myostatin gene increases muscle mass and enhances racing performance in heterozygote dogs.,” PLoS Genetics, vol. 3, no. 5, article e79, 2007.
- E. W. Hill, J. Gu, S. S. Eivers et al., “A sequence polymorphism in MSTN predicts sprinting ability and racing stamina in thoroughbred horses,” PLoS ONE, vol. 5, no. 1, Article ID e8645, 2010.
- J. Topal, M. Gacsi, E. Miklosi, Z. Viranyi, E. Kubinyi, and V. Csanyi, “Attachment to humans: a comparative study on hand-reared wolves and differently socialized dog puppies,” Animal Behaviour, vol. 70, no. 6, pp. 1367–1375, 2005.
- M. Gacsi, B. Gyori, E. Miklosi et al., “Species-specific differences and similarities in the behavior of hand-raised dog and wolf pups in social situations with humans,” Developmental Psychobiology, vol. 47, no. 2, pp. 111–122, 2005.
- M. Gácsi, B. Györi, Z. Virányi et al., “Explaining dog wolf differences in utilizing human pointing gestures: selection for synergistic shifts in the development of some social skills,” PLoS ONE, vol. 4, no. 8, Article ID e6584, 2009.
- P. Jones, K. Chase, A. Martin, P. Davern, E. A. Ostrander, and K. G. Lark, “Single-nucleotide-polymorphism-based association mapping of dog stereotypes,” Genetics, vol. 179, no. 2, pp. 1033–1044, 2008.
- Y. Takeuchi, F. Kaneko, C. Hashizume et al., “Association analysis between canine behavioural traits and genetic polymorphisms in the Shiba Inu breed,” Animal Genetics, vol. 40, no. 5, pp. 616–622, 2009.