De Novo Assembly and Transcriptome Characterization of Canine Retina Using High-Throughput Sequencing

Table 2

Distribution of mapped reads to different transcript types and gene regions with reference Canis lupus familiaris genome build version CanFam3.1.

	Uniquely mapped	Nonspecifically mapped	Mapped reads
	Number of reads	Number of reads	Number of reads	%
Total exon reads	75,883	1,305	77,188	34.05
Exon-exon reads	32,385	768	33,153	14.63
Exon-intron reads	6,210	35	6,245	2.75
Total intron reads	107,818	2,280	110,098	48.57
Total gene reads	222,296	4,388	226,684	100.00