De Novo Assembly and Transcriptome Characterization of Canine Retina Using High-Throughput Sequencing

Table 5

KEGG biochemical mappings for C. lupus familiaris: enzyme commission assignment of assembled transcripts.

KEGG pathway	EC count; (unique transcripts)
Metabolism	1213
Overview	135
Carbohydrate metabolism	238
Energy metabolism	96
Lipid metabolism	176
Nucleotide metabolism	79
Amino acid metabolism	164
Metabolism of other amino acids	53
Glycan biosynthesis and metabolism	115
Metabolism of cofactors and vitamins	67
Metabolism of terpenoids and polyketides	19
Biosynthesis of other secondary metabolites	17
Xenobiotics biodegradation and metabolism	54
Genetic Information Processing	204
Transcription	21
Translation	54
Folding, sorting, and degradation	97
Replication and repair	32
Environmental Information Processing	340
Signal transduction	330
Signaling molecules and interaction	10
Cellular Processes	276
Transport and catabolism	115
Cell motility	18
Cell growth and death	70
Cell communication	73
Organismal Systems	705
Immune system	151
Endocrine system	196
Circulatory system	26
Digestive system	67
Excretory system	37
Nervous system	163
Sensory system	15
Development	30
Environmental adaptation	20
Human Diseases	832
Cancers	320
Immune diseases	23
Neurodegenerative diseases	114
Substance dependence	42
Cardiovascular diseases	12
Endocrine and metabolic diseases	24
Infectious diseases	297
Total	3570