|
| Name of crop plant | Consortium/initiative | URL | References |
|
| Alfalfa (Medicago sativa) | Consortium | http://www.alfalfa-genome.org/www/ | Young et al., 2011 [7] |
|
| Apple (Malus domestica) | Consortium | http://www.rosaceae.org/species/malus/malus_spp | Velasco et al., 2010 [8] |
|
| Banana (Musa acuminate) | The Global Musa Genomics Consortium | http://www.musagenomics.org/ | D’Hont et al., [9] |
|
| Barley (Hordeum vulgare) | International Barley Genome Sequencing Consortium | http://www.public.iastate.edu/~imagefpc/IBSC%20Webpage/IBSC%20Template-home.html | The International Barley Genome Sequencing Consortium [10] |
|
| Cacao (Theobroma cacao) | Consortium | http://www.cacaogenomedb.org/ | Argout et al., 2011 [11] |
|
| Cannabis (Cannabis sativa) | Consortium | http://genome.ccbr.utoronto.ca/index.html?org=C.+sativa&db=canSat3&hgsid=11252 | van Bakel et al., 2011 [12] |
|
| Castor bean (Ricinus communis) | TIGR | http://castorbean.jcvi.org/ | Chan et al., 2010 [13] |
|
| Chickpea (Cicer arietinum) | Consortium (ICRISAT-BGI) | http://www.icrisat.org/gt-bt/ICGGC/GenomeManuscript.htm | Varshney et al., 2013 [14] |
|
| Chocolate (Theobroma cacao) | Consortium | http://www.cacaogenomedb.org/main | Argout et al., 2011 [11] |
|
| Cotton (Gossypium raimondii) | BGI | http://www.cottondb.org/wwwroot/cdbhome.php | Wang et al., 2012 [15] |
|
| Common bean (Phaseolus vulgaris L.) | Consortium | http://www.phytozome.net/commonbean.php | Schmutz et al., 2014 [16] |
|
| Crucifer (Thellungiella parvula) | Consortium | http://www.brassica.info/info/events.php | Dassanayake et al., 2011 [17] |
|
| Cucumber (Cucumis sativus) | International Cucurbit Genomics Initiative (ICuGI) | http://www.icugi.org/ |
Huang et al., 2009 [18] |
|
| Date palm (Phoenix dactylifera) | Consortium | http://qatar-weill.cornell.edu/research/datepalmGenome/download.html | Al-Dous et al., 2011 [19] |
|
| Wheat (Triticum aestivum) | International Wheat Genome Sequencing Consortium (IWGSC) | http://www.wheatgenome.org/ | International Wheat Genome Sequencing Consortium, 2014 [20] |
|
| Foxtail millet (Setaria italica) | Beijing Genomics Institute and the Joint Genomes Institute | http://www.phytozome.net/foxtailmillet.php | Zhang et al., [21] Bennetzen et al. [22] |
|
| Grape (Vitis vinifera) | Consortium | http://www.genoscope.cns.fr/externe/GenomeBrowser/Vitis/ | Jaillon et al., 2007 [23] |
|
| Jatropha curcas L. | Consortium | http://www.kazusa.or.jp/jatropha/ | Sato et al., 2011 [24] |
|
| Lotus (Lotus japonicas) | Consortium | http://www.kazusa.or.jp/lotus/ | Sato et al., 2008 [25] |
|
| Maize (Zea mays) | Consortium | http://www.maizegdb.org/ | Schnable et al., 2009 [26] |
|
| Model Grass (Brachypodium distachyon) | Consortium | http://www.brachypodium.org/ | International Brachypodium Initiative, 2010 [27] |
|
| Mosses (Physcomitrella patens) | JGI | http://genome.jgi-psf.org/Phypa1_1/Phypa1_1.home.html | Rensing et al., 2008 [28] |
|
| Mouse ear cress (Arabidopsis thaliana, Arabidopsis lyrata) | The Arabidopsis Genome Initiative (2000) | http://www.arabidopsis.org/ | The Arabidopsis Genome Initiative, 2000 [29]; Cao et al., 2011 [30]; Hu et al., 2011 [31] |
|
| Papaya (Carica papaya) | Consortium | http://www.plantgdb.org/CpGDB/ | Ming et al., 2008 [32] |
|
| Peach (Prunus persica) | International Peach Genome Initiative | http://www.rosaceae.org/peach/genome | International Peach genome initiative 2013 [33] |
|
| Pigeon pea (Cajanus cajan) | International Initiative for Pigeonpea Genomics (IIPG) | http://www.icrisat.org/gt-bt/iipg/Home.html | Varshney et al., 2011 [34] |
|
| Poplar (Populus trichocarpa) | JGI | http://genome.jgi-psf.org/Poptr1_1/Poptr1_1.home.html | Tuskan et al., 2006 [35] |
|
| Potato (Solanum tuberosum) | Consortium (PGSC) | http://www.potatogenome.net/index.php/Main_Page | The Potato Genome Sequencing Consortium, 2011 [36] |
|
| Rape seed (Brassica napus) | Consortium (MGBP) | http://www.plantgdb.org/BrGDB/ | Wang et al., 2011 [37] |
|
| Rice (Oryza sativa ssp. indica and japonica) | Consortium (IRGSP) | http://rgp.dna.affrc.go.jp/E/IRGSP/index.html | Yu et al., 2002 [38]; Goff et al., 2002 [39] |
|
| Sorghum (Sorghum bicolor) | JGI | http://www.plantgdb.org/SbGDB/ | Paterson et al., 2009 [40] |
|
| Soybeans (Glycine max) | JGI | http://www.phytozome.net/soybean_er.php | Schmutz et al., 2010 [41] |
|
| Strawberry (Fragaria vesca) | Consortium | http://www.strawberrygenome.org/ | Shulaev et al., 2011 [42] |
|
| Tomato (Solanum lycopersicum) | Consortium | http://solgenomics.net/organism/Solanum_lycopersicum/genome | The Tomato Genome Consortium 2012 [43] |
|
| Watermelon (Citrullus lanatus) | International Watermelon Genomics Initiative | http://www.iwgi.org/ | Guo et al., 2013 [44] |
|
| Mung bean (Vigna radiata) | Not available | http://vigra.comparative-legumes.org/ | Kang et al., 2014 [45] |
|
