Baculovirus: Molecular Insights on Their Diversity and Conservation

Table 1

Baculovirus complete genomes.

Genus	Name	Abbreviation	Code	Accesion number	Genome; (bp)	Annotated ORFs	GC%	Ref.
Alphabaculovirus-Group I	Antheraea pernyi NPV-Z	AnpeNPV-Z	APN	NC_008035	126629	145	53.5	[27]
	Antheraea pernyi NPV-L2	AnpeNPV-L2	AP2	EF207986	126246	144	53.5	[28]
	Anticarsia gemmatalis MNPV-2D	AgMNPV-2D	AGN	NC_008520	132239	152	44.5	[29]
	Autographa californica MNPV-C6	AcMNPV-C6	ACN	NC_001623	133894	154	40.7	[30]
	Bombyx mori NPV	BmNPV	BMN	NC_001962	128413	137	40.4	[31]
	Bombyx mandarina NPV	BomaNPV	BON	NC_012672	126770	141	40.2	[32]
	Choristoneura fumiferana DEF MNPV	CfDEFMNPV	CDN	NC_005137	131160	149	45.8	[33]
	Choristoneura fumiferana MNPV	CfMNPV	CFN	NC_004778	129593	145	50.1	[34]
	Epiphyas postvittana NPV	EppoNPV	EPN	NC_003083	118584	136	40.7	[35]
	Hyphantria cunea NPV	HycuNPV	HCN	NC_007767	132959	148	45.5	[36]
	Maruca vitrata MNPV	MaviMNPV	MVN	NC_008725	111953	126	38.6	[37]
	Orgyia pseudotsugata MNPV	OpMNPV	OPN	NC_001875	131995	152	55.1	[38]
	Plutella xylostella MNPV	PlxyMNPV	PXN	NC_008349	134417	149	40.7	U
	Rachiplusia ou MNPV	RoMNPV	RON	NC_004323	131526	146	39.1	[39]
Alphabaculovirus-Group II	Adoxophyes honmai NPV	AdhoNPV	AHN	NC_004690	113220	125	35.6	[40]
	Adoxophyes orana NPV	AdorNPV	AON	NC_011423	111724	121	35.0	[41]
	Agrotis ipsilon NPV	AgipNPV	AIN	NC_011345	155122	163	48.6	U
	Agrotis segetum NPV	AgseNPV	ASN	NC_007921	147544	153	45.7	[42]
	Apocheima cinerarium NPV	ApciNPV	APO	FJ914221	123876	118	33.4	U
	Chrysodeixis chalcites NPV	ChChNPV	CCN	NC_007151	149622	151	39.0	[43]
	Clanis bilineata NPV	ClbiNPV	CBN	NC_008293	135454	129	37.7	[44]
	Ectropis obliqua NPV	EcobNPV	EON	NC_008586	131204	126	37.6	[45]
	Euproctis pseudoconspersa NPV	EupsNPV	EUN	NC_012639	141291	139	40.4	[46]
	Helicoverpa armigera NPV-C1	HearNPV-C1	HA1	NC_003094	130759	135	38.9	[47]
	Helicoverpa armigera NPV-G4	HearNPV-G4	HA4	NC_002654	131405	135	39.0	[47]
	Helicoverpa armigera MNPV	HearMNPV	HAN	NC_011615	154196	162	40.1	[48]
	Helicoverpa armigera SNPV-NNg1	HearSNPV-NNg1	HAS	NC_011354	132425	143	39.2	[49]
	Helicoverpa zea SNPV	HzSNPV	HZN	NC_003349	130869	139	39.1	U
	Leucania separata NPV-AH1	LeseNPV-AH1	LSN	NC_008348	168041	169	48.6	[50]
	Lymantria dispar MNPV	LdMNPV	LDN	NC_001973	161046	163	57.5	[51]
	Lymantria xylina MNPV	LyxyMNPV	LXN	NC_013953	156344	157	53.5	[52]
	Mamestra configurata NPV-90-2	MacoNPV-90-2	MCN	NC_003529	155060	169	41.7	[53]
	Mamestra configurata NPV-90-4	MacoNPV-90-4	MC4	AF539999	153656	168	41.7	[54]
	Mamestra configurata NPV-B	MacoNPV-B	MCB	NC_004117	158482	169	40.0	[55]
	Orgyia leucostigma NPV	OrleNPV	OLN	NC_010276	156179	135	39.9	U
	Spodoptera exigua MNPV	SeMNPV	SEN	NC_002169	135611	142	43.8	U
	Spodoptera frugiperda MNPV-3AP2	SfMNPV-3AP2	SF2	NC_009011	131330	143	40.2	[56]
	Spodoptera frugiperda MNPV-19	SfMNPV-19	SF9	EU258200	132565	141	40.3	[57]
	Spodoptera litura NPV-II	SpliNPV-II	SLN	NC_011616	148634	147	45.0	U
	Spodoptera litura NPV-G2	SpliNPV-G2	SL2	NC_003102	139342	141	42.8	[58]
	Trichoplusia ni SNPV	TnSNPV	TNN	NC_007383	134394	144	39.0	[59]
Betabaculovirus	Adoxophyes orana GV	AdorGV	AOG	NC_005038	99657	119	34.5	[60]
	Agrotis segetum GV	AgseGV	ASG	NC_005839	131680	132	37.3	U
	Choristoneura occidentalis GV	ChocGV	COG	NC_008168	104710	116	32.7	[61]
	Cryptophlebia leucotreta GV	CrleGV	CLG	NC_005068	110907	129	32.4	[62]
	Cydia pomonella GV	CpGV	CPG	NC_002816	123500	143	45.3	[63]
	Helicoverpa armigera GV	HearGV	HAG	NC_010240	169794	179	40.8	[64]
	Phthorimea operculella GV	PhopGV	POG	NC_004062	119217	130	35.7	[65]
	Plutella xylostella GV	PlxyGV	PXG	NC_002593	100999	120	40.7	[66]
	Pieris rapae GV	PiraGV	PRG	GQ884143	108592	120	33.2	U
	Pseudaletia unipuncta GV-Hawaiin	PsunGV	PUG	EU678671	176677	183	39.8	U
	Spodoptera litura GV-K1	SpliGV	SLG	NC_009503	124121	136	38.8	[67]
	Xestia c-nigrum GV	XnGV	XCG	NC_002331	178733	181	40.7	[68]
Gamma	Neodiprion abietis NPV	NeabNPV	NAN	NC_008252	84264	93	33.4	[69]
	Neodiprion lecontei NPV	NeleNPV	NLN	NC_005906	81755	93	33.3	[70, 71]
	Neodiprion sertifer NPV	NeseNPV	NSN	NC_005905	86462	90	33.8	[71, 72]
Delta	Culex nigripalpus NPV	CuniNPV	CNN	NC_003084	108252	109	50.9	[73]

This table contains all of baculoviruses used in bioinformatic studies, sorted by genus (and within them by alphabetical order). MNPV is the abbreviation of multicapsid nucleopolyhedrovirus; NPV is the abbreviation of nucleopolyhedrovirus; SNPV is the abbreviation of single nucleopolyhedrovirus; GV is the abbreviation of granulovirus. The accession numbers are from National Center for Biotechnology Information (NCBI, http://www.ncbi.nlm.nih.gov/) and correspond to the sequences of complete genomes. Code is an acronym used for practicality. U: unpublished.