Detection of Horizontal Gene Transfers from Phylogenetic Comparisons

Table 3

Software, nucleotide substitution models and criteria used for phylogenetic analysis of 16S and dszC genes in each tested method.

Method	Gene	Nucleotide substitution model	Gamma distribution	Invariable sites proportion
NJ	dszC	Tamura-Nei	0.71	—
	16S	Tamura-Nei	0.69	—
ML	dszC	GTR+G	0.8291	—
	16S	GTR+G+I	0.8125	0.3667
BA	dszC	GTR+G	0.8291	—
	16S	GTR+G+I	0.8126	0.3667