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International Journal of Evolutionary Biology
Volume 2013 (2013), Article ID 639635, 5 pages
Modeling Extinction Risk of Endemic Birds of Mainland China
Department of Zoology, University of British Columbia, Vancouver, BC, Canada V6T 1Z4
Received 5 July 2013; Revised 20 October 2013; Accepted 4 November 2013
Academic Editor: Hirohisa Kishino
Copyright © 2013 Youhua Chen. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
- C. Rahbek and R. K. Colwell, “Biodiversity: species loss revisited,” Nature, vol. 473, no. 7347, pp. 288–289, 2011.
- T. J. Davies, G. F. Smith, D. U. Bellstedt et al., “Extinction risk and diversification are linked in a plant biodiversity hotspot,” PLoS Biology, vol. 9, no. 5, Article ID e1000620, 2011.
- A. D. Barnosky, N. Matzke, S. Tomiya et al., “Has the Earth's sixth mass extinction already arrived?” Nature, vol. 471, no. 7336, pp. 51–57, 2011.
- D. B. Wake and V. T. Vredenburg, “Are we in the midst of the sixth mass extinction? A view from the world of amphibians,” Proceedings of the National Academy of Sciences of the United States of America, vol. 105, no. 1, pp. 11466–11473, 2008.
- R. May, J. Lawton, and N. Stork, “Assessing extinction rates,” in Extinction Rates, J. Lawton and R. May, Eds., pp. 1–24, Oxford University Press, Oxford, UK, 1995.
- D. P. Faith, “Threatened species and the potential loss of phylogenetic diversity: conservation scenarios based on estimated extinction probabilities and phylogenetic risk analysis,” Conservation Biology, vol. 22, no. 6, pp. 1461–1470, 2008.
- M. Zmihorski, J. Dziarska-Palac, T. Sparks, and P. Tryjanowski, “Ecological correlates of the popularity of birds and butterflies in internet information resources,” Oikos, vol. 122, pp. 183–190, 2013.
- P. Prokop and J. Fancovicova, “Does colour matter? The influence of animal warning coloration on human emotions and willingness to protect them,” Animal Conservation, vol. 16, no. 4, pp. 458–466, 2013.
- Y. H. Chen, “Prioritizing avian conservation areas in China by hotspot scoring, heuristics and optimisation,” Acta Ornithologica, vol. 42, no. 2, pp. 119–128, 2007.
- F. He, “Area-based assessment of extinction risk,” Ecology, vol. 93, pp. 974–980, 2012.
- R. E. Ricklefs, “Global variation in the diversification rate of passerine birds,” Ecology, vol. 87, no. 10, pp. 2468–2478, 2006.
- A. B. Phillimore, C. D. L. Orme, R. G. Davies et al., “Biogeographical basis of recent phenotypic divergence among birds: a global study of subspecies richness,” Evolution, vol. 61, no. 4, pp. 942–957, 2007.
- Y. H. Chen, “Avian biogeography and conservation on Hainan Island, China,” Zoological Science, vol. 25, no. 1, pp. 59–67, 2008.
- N. Cooper, R. P. Freckleton, and W. Jetz, “Phylogenetic conservatism of environmental niches in mammals,” Proceedings of the Royal Society B, vol. 278, no. 1716, pp. 2384–2391, 2011.
- C. Tucker, M. Cadotte, T. Davies, and T. Rebelo, “Incorporating geographical and evolutionary rarity into conservation prioritization,” Conservation Biology, vol. 26, pp. 593–601, 2012.
- Y. Chen, “Conservation priority for endemic birds of mainland China based on a phylogenetic framework,” Chinese Birds, vol. 4, pp. 248–253, 2013.
- B. Daru, K. Yessoufou, L. Mankga, and T. Davies, “A global trend towards the loss of evolutionarily unique species in mangrove ecosystems,” PLoS One, vol. 8, Article ID e66686, 2013.
- K. Yessoufou, B. Daru, and T. Davies, “Phylogenetic patterns of extinction risk in the Eastern Arc Ecosystems, an African biodiversity hotspot,” PLoS One, vol. 7, no. 10, Article ID e47082, 2012.
- Y. Chen, “A phylogenetic subclade analysis of range sizes of endemic woody see plant species of China: trait conservatism, diversification rates and evolutionary models,” Journal of Systematics and Evolution, vol. 51, no. 5, pp. 590–600, 2013.
- L. J. Harmon, J. B. Losos, T. Jonathan Davies et al., “Early bursts of body size and shape evolution are rare in comparative data,” Evolution, vol. 64, no. 8, pp. 2385–2396, 2010.
- M. E. K. Evans, S. A. Smith, R. S. Flynn, and M. J. Donoghue, “Climate, niche evolution, and diversification of the “bird-cage” evening primroses (Oenothera, sections Anogra and Kleinia),” American Naturalist, vol. 173, no. 2, pp. 225–240, 2009.
- Y. Chen and J. Bi, “Biogeography and hotspots of amphibian species of China: implications to reserve selection and conservation,” Current Science, vol. 92, no. 4, pp. 480–489, 2007.
- F. Lei, J. Lu, Y. Liu, Y. Qu, and Z. Yin, “Endemic bird species to China and their distribution,” Current Zoology, vol. 48, pp. 599–610, 2002.
- Y. Wang, S. Chen, and P. Ding, “Testing multiple assembly rule models in avian communities on islands of an inundated lake, Zhejiang Province, China,” Journal of Biogeography, vol. 38, no. 7, pp. 1330–1344, 2011.
- F. Lei and T. Lu, China Endemic Birds, Science Press, Beijing, China, 2006.
- F. M. Lei, G. A. Wei, H. F. Zhao, Z. H. Yin, and J. L. Lu, “China subregional avian endemism and biodiversity conservation,” Biodiversity and Conservation, vol. 16, no. 4, pp. 1119–1130, 2007.
- Y. Zhang, “Endemic birds of China,” Bulletin of Biology, vol. 39, pp. 22–25, 2004.
- W. Jetz, H. Thomas, J. Joy, K. Hartmann, and A. Mooers, “The global diversity of birds in space and time,” Nature, vol. 491, pp. 444–448, 2012.
- J. Sukumaran and M. T. Holder, “DendroPy: a Python library for phylogenetic computing,” Bioinformatics, vol. 26, no. 12, pp. 1569–1571, 2010.
- M. J. Sanderson, “Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach,” Molecular Biology and Evolution, vol. 19, no. 1, pp. 101–109, 2002.
- L. J. Harmon, J. A. Schulte II, A. Larson, and J. B. Losos, “Tempo and mode of evolutionary radiation in iguanian lizards,” Science, vol. 301, no. 5635, pp. 961–964, 2003.
- L. J. Harmon, J. T. Weir, C. D. Brock, R. E. Glor, and W. Challenger, “GEIGER: investigating evolutionary radiations,” Bioinformatics, vol. 24, no. 1, pp. 129–131, 2008.
- R Development Core Team, R: A Language and Environment for Statistical Computing, R Foundation for Statistical Computing, Vienna, Austria, 2011, http://www.R-project.org.
- H. Akaike, “Information theory as an extension of the maximum likelihood principle,” in Proceedings of the 2nd International Symposium on Information Theory, B. Petrov and F. Csaki, Eds., pp. 276–281, Akademiai Kiado, Budapest, Hungary, 1974.
- A. Purvis, P. M. Agapow, J. L. Gittleman, and G. M. Mace, “Nonrandom extinction and the loss of evolutionary history,” Science, vol. 288, no. 5464, pp. 328–330, 2000.
- G. J. Russell, T. M. Brooks, M. M. Mckinney, and C. Gregory Anderson, “Present and future taxonomic selectivity in bird and mammal extinctions,” Conservation Biology, vol. 12, no. 6, pp. 1365–1376, 1998.
- T. A. Heath, S. M. Hedtke, and D. M. Hillis, “Taxon sampling and the accuracy of phylogenetic analyses,” Journal of Systematics and Evolution, vol. 46, no. 3, pp. 239–257, 2008.
- S. Poe, “Sensitivity of phylogeny estimation to taxonomic sampling,” Systematic Biology, vol. 47, no. 1, pp. 18–31, 1998.