Research Article

A Comprehensive Bioinformatics Analysis of the Nudix Superfamily in Arabidopsis thaliana

Table 3

The distribution of exons and intron phases in multimember families of Nudix hydrolases in A. thaliana emphasizing the conservation in intron/exon architecture and of intron phase patterns within families.

FamilyMembersNumber of exons/size of protein modules encoded by the exons (N C)Intron phases N C

A hydrolasesAt1g30110 5–22,17,31,31,74 0,0,0,2
At3g106206–77,17,31,31,39,210,0,0,2,0
At5g063406–76,17,31,31,39,330,0,0,2,0

DIPPsAt1g183002–63,1442
At1g735402–43,1342
At1g14860 4–23,36,28,89 2,0,0
At3g126004–23,39,28,902,0,0
At1g128805–23,42,28,50,532,0,0,0
At2g016705–28,35,28,43,482,0,0,0
At3g266905–23,40,28,52,592,0,0,0

FGFTNEsAt2g04430 8–50,22,46,26,17,11,38,73 0,0,0,0,0,2,0
At4g127208–48,22,47,26,17,11,38,730,0,0,0,0,2,0
At5g476508–47,22,46,27,17,11,37,620,0,0,0,0,2,0
At5g472406–60,22,47,43,48,750,0,0,0,0
At2g044508–48,22,47,26,17,11,37,750,0,0,0,0,2,0

Coenzyme A pyrophosphatasesAt5g45940 4–66,48,40,68 1,0,0
At1g289604–111,48,40,741,0,0
At2g339806–105,48,40,66,30,131,0,0,0,1