Table of Contents for Year 2012 [64 articles]

• Screen for Footprints of Selection during Domestication/Captive Breeding of Atlantic Salmon, Anti Vasemägi, Jan Nilsson, Philip McGinnity, Tom Cross, Patrick O’Reilly, Brian Glebe, Bo Peng, Paul Ragnar Berg, and Craig Robert Primmer
  Volume 2012 (2012), Article ID 628204, 14 pages
• Gemi: PCR Primers Prediction from Multiple Alignments, Haitham Sobhy and Philippe Colson
  Volume 2012 (2012), Article ID 783138, 5 pages
• The α₁AT and TIMP-1 Gene Polymorphism in the Development of Asthma, Manish Kumar, D. P. Bhadoria, Koushik Dutta, Mitesh Kumar F., Bharat Singh, Seema Singh, Anil K. Chhillar, D. Behera, and G. L. Sharma
  Volume 2012 (2012), Article ID 968267, 10 pages
• TnpPred: A Web Service for the Robust Prediction of Prokaryotic Transposases, Gonzalo Riadi, Cristobal Medina-Moenne, and David S. Holmes
  Volume 2012 (2012), Article ID 678761, 5 pages
• Comparative Analysis of MicroRNAs between Sporophyte and Gametophyte of Porphyra yezoensis, Linwen He, Aiyou Huang, Songdong Shen, Jianfeng Niu, and Guangce Wang
  Volume 2012 (2012), Article ID 912843, 9 pages
• Correlation of Aquaporins and Transmembrane Solute Transporters Revealed by Genome-Wide Analysis in Developing Maize Leaf, Xun Yue, XiangYu Zhao, YuKui Fei, and Xiansheng Zhang
  Volume 2012 (2012), Article ID 546930, 14 pages
• Epigenetic Control of Reprogramming and Cellular Differentiation, Lucia Latella, Daniela Palacios, Sonia Forcales, and Pier Lorenzo Puri
  Volume 2012 (2012), Article ID 538639, 2 pages
• Comparative Genome Sequence Analysis Reveals the Extent of Diversity and Conservation for Glycan-Associated Proteins in Burkholderia spp., Hui San Ong, Rahmah Mohamed, and Mohd Firdaus-Raih
  Volume 2012 (2012), Article ID 752867, 15 pages
• A Systems Approach and Skeletal Myogenesis, Yoshiaki Ito, Tomohiro Kayama, and Hiroshi Asahara
  Volume 2012 (2012), Article ID 759407, 7 pages
• Epigenetic Regulation of B Lymphocyte Differentiation, Transdifferentiation, and Reprogramming, Bruna Barneda-Zahonero, Lidia Roman-Gonzalez, Olga Collazo, Tokameh Mahmoudi, and Maribel Parra
  Volume 2012 (2012), Article ID 564381, 10 pages
• Empirical Bayes Model Comparisons for Differential Methylation Analysis, Mingxiang Teng, Yadong Wang, Seongho Kim, Lang Li, Changyu Shen, Guohua Wang, Yunlong Liu, Tim H. M. Huang, Kenneth P. Nephew, and Curt Balch
  Volume 2012 (2012), Article ID 376706, 10 pages
• Feature Identification of Compensatory Gene Pairs without Sequence Homology in Yeast, Chien-Hua Peng, Shu-Hsi Lin, Shih-Chi Peng, Ping-Chiang Lyu, Masanori Arita, and Chuan-Yi Tang
  Volume 2012 (2012), Article ID 653174, 7 pages
• Interactome of Radiation-Induced microRNA-Predicted Target Genes, Tenzin W. Lhakhang and M. Ahmad Chaudhry
  Volume 2012 (2012), Article ID 569731, 12 pages
• Comparative Analysis of SWIRM Domain-Containing Proteins in Plants, Yan Gao, Songguang Yang, Lianyu Yuan, Yuhai Cui, and Keqiang Wu
  Volume 2012 (2012), Article ID 310402, 8 pages
• Predictive Models of Gene Regulation from High-Throughput Epigenomics Data, Sonja Althammer, Amadís Pagès, and Eduardo Eyras
  Volume 2012 (2012), Article ID 284786, 13 pages
• Multidimensional Scaling Applied to Histogram-Based DNA Analysis, António C. Costa, J. A. Tenreiro Machado, and Maria Dulce Quelhas
  Volume 2012 (2012), Article ID 289694, 11 pages
• Translational Control across Eukaryotes, Greco Hernández
  Volume 2012 (2012), Article ID 317690, 2 pages
• Evolutionary Conservation and Diversification of the Translation Initiation Apparatus in Trypanosomatids, Alexandra Zinoviev and Michal Shapira
  Volume 2012 (2012), Article ID 813718, 10 pages
• Identification and Characterization of MicroRNAs in Macaca fascicularis by EST Analysis, Hao Yang, Haiyang Zhang, Lin Zhu, Chenyu Zhang, and Donghai Li
  Volume 2012 (2012), Article ID 957607, 9 pages
• Turning on Myogenin in Muscle: A Paradigm for Understanding Mechanisms of Tissue-Specific Gene Expression, Herve Faralli and F. Jeffrey Dilworth
  Volume 2012 (2012), Article ID 836374, 10 pages
• Transposable Elements Are a Significant Contributor to Tandem Repeats in the Human Genome, Musaddeque Ahmed and Ping Liang
  Volume 2012 (2012), Article ID 947089, 7 pages
• Diversity of Eukaryotic Translational Initiation Factor eIF4E in Protists, Rosemary Jagus, Tsvetan R. Bachvaroff, Bhavesh Joshi, and Allen R. Place
  Volume 2012 (2012), Article ID 134839, 21 pages
• Global Transcriptional Analysis of Olfactory Genes in the Head of Pine Shoot Beetle, Tomicus yunnanensis, Jia-Ying Zhu, Ning Zhao, and Bin Yang
  Volume 2012 (2012), Article ID 491748, 10 pages
• Epigenetic Alterations in Muscular Disorders, Chiara Lanzuolo
  Volume 2012 (2012), Article ID 256892, 12 pages
• Intron Retention and TE Exonization Events in ZRANB2, Sang-Je Park, Jae-Won Huh, Young-Hyun Kim, Heui-Soo Kim, and Kyu-Tae Chang
  Volume 2012 (2012), Article ID 170208, 7 pages
• Peanut (Arachis hypogaea) Expressed Sequence Tag Project: Progress and Application, Suping Feng, Xingjun Wang, Xinyou Zhang, Phat M. Dang, C. Corley Holbrook, Albert K. Culbreath, Yaoting Wu, and Baozhu Guo
  Volume 2012 (2012), Article ID 373768, 9 pages
• The Distribution of eIF4E-Family Members across Insecta, Gritta Tettweiler, Michelle Kowanda, Paul Lasko, Nahum Sonenberg, and Greco Hernández
  Volume 2012 (2012), Article ID 960420, 15 pages
• The Stability of the Induced Epigenetic Programs, Maria J. Barrero
  Volume 2012 (2012), Article ID 434529, 9 pages
• Tackling Skeletal Muscle Cells Epigenome in the Next-Generation Sequencing Era, Raffaella Fittipaldi and Giuseppina Caretti
  Volume 2012 (2012), Article ID 979168, 8 pages
• Genome Wide Analysis of Nucleotide-Binding Site Disease Resistance Genes in Brachypodium distachyon, Shenglong Tan and Song Wu
  Volume 2012 (2012), Article ID 418208, 12 pages
• Before It Gets Started: Regulating Translation at the 5′ UTR, Patricia R. Araujo, Kihoon Yoon, Daijin Ko, Andrew D. Smith, Mei Qiao, Uthra Suresh, Suzanne C. Burns, and Luiz O. F. Penalva
  Volume 2012 (2012), Article ID 475731, 8 pages
• Cytoplasmic Ribonucleoprotein Foci in Eukaryotes: Hotspots of Bio(chemical)Diversity, Carla Layana, Paola Ferrero, and Rolando Rivera-Pomar
  Volume 2012 (2012), Article ID 504292, 7 pages
• UniPrimer: A Web-Based Primer Design Tool for Comparative Analyses of Primate Genomes, Nomin Batnyam, Jimin Lee, Jungnam Lee, Seung Bok Hong, Sejong Oh, and Kyudong Han
  Volume 2012 (2012), Article ID 520732, 8 pages
• Human Genomic Deletions Generated by SVA-Associated Events, Jungnam Lee, Jungsu Ha, Seung-Yeol Son, and Kyudong Han
  Volume 2012 (2012), Article ID 807270, 7 pages
• Conservation of the RNA Transport Machineries and Their Coupling to Translation Control across Eukaryotes, Paula Vazquez-Pianzola and Beat Suter
  Volume 2012 (2012), Article ID 287852, 13 pages
• Repertoire of Protein Kinases Encoded in the Genome of Takifugu rubripes, R. Rakshambikai, S. Yamunadevi, K. Anamika, N. Tyagi, and N. Srinivasan
  Volume 2012 (2012), Article ID 258284, 12 pages
• Versatility of RNA-Binding Proteins in Cancer, Laurence Wurth
  Volume 2012 (2012), Article ID 178525, 11 pages
• On the Diversification of the Translation Apparatus across Eukaryotes, Greco Hernández, Christopher G. Proud, Thomas Preiss, and Armen Parsyan
  Volume 2012 (2012), Article ID 256848, 14 pages
• The Role of Translation Initiation Regulation in Haematopoiesis, Godfrey Grech and Marieke von Lindern
  Volume 2012 (2012), Article ID 576540, 10 pages
• Pseudogenes, Yusuf Tutar
  Volume 2012 (2012), Article ID 424526, 4 pages
• The Bic-C Family of Developmental Translational Regulators, Chiara Gamberi and Paul Lasko
  Volume 2012 (2012), Article ID 141386, 23 pages
• The eIF4F and eIFiso4F Complexes of Plants: An Evolutionary Perspective, Ryan M. Patrick and Karen S. Browning
  Volume 2012 (2012), Article ID 287814, 12 pages
• Regulation of Translation Initiation under Abiotic Stress Conditions in Plants: Is It a Conserved or Not so Conserved Process among Eukaryotes?, Alfonso Muñoz and M. Mar Castellano
  Volume 2012 (2012), Article ID 406357, 8 pages
• Functional Genomic Analysis of Variation on Beef Tenderness Induced by Acute Stress in Angus Cattle, Chunping Zhao, Fei Tian, Ying Yu, Juan Luo, Apratim Mitra, Fei Zhan, Yali Hou, George Liu, Linsen Zan, M. Scott Updike, and Jiuzhou Song
  Volume 2012 (2012), Article ID 756284, 11 pages
• Transcriptional Regulations on the Low-Temperature-Induced Floral Transition in an Orchidaceae Species, Dendrobium nobile: An Expressed Sequence Tags Analysis, Shan Liang, Qing-Sheng Ye, Rui-Hong Li, Jia-Yi Leng, Mei-Ru Li, Xiao-Jing Wang, and Hong-Qing Li
  Volume 2012 (2012), Article ID 757801, 14 pages
• The Complete Mitochondrial Genome of Ctenoptilum vasava (Lepidoptera: Hesperiidae: Pyrginae) and Its Phylogenetic Implication, Jiasheng Hao, Qianqian Sun, Huabin Zhao, Xiaoyan Sun, Yonghua Gai, and Qun Yang
  Volume 2012 (2012), Article ID 328049, 13 pages
• Alternative Mechanisms to Initiate Translation in Eukaryotic mRNAs, Encarnación Martínez-Salas, David Piñeiro, and Noemí Fernández
  Volume 2012 (2012), Article ID 391546, 12 pages
• Expression, Purification, and Characterization of Ras Protein (BmRas1) from Bombyx mori, Yanping Quan, Guangqiang Liu, Wei Yu, Zuoming Nie, Jian Chen, Zhengbing Lv, and Yaozhou Zhang
  Volume 2012 (2012), Article ID 747539, 8 pages
• PASSIOMA: Exploring Expressed Sequence Tags during Flower Development in Passiflora spp., Lucas Cutri and Marcelo Carnier Dornelas
  Volume 2012 (2012), Article ID 510549, 11 pages
• Generation and Analysis of Expressed Sequence Tags from Chimonanthus praecox (Wintersweet) Flowers for Discovering Stress-Responsive and Floral Development-Related Genes, Shunzhao Sui, Jianghui Luo, Jing Ma, Qinlong Zhu, Xinghua Lei, and Mingyang Li
  Volume 2012 (2012), Article ID 134596, 13 pages
• In Silico RAPD Priming Sites in Expressed Sequences and iSCAR Markers for Oil Palm, Balakrishnan Vasanthakumari Premkrishnan and Vadivel Arunachalam
  Volume 2012 (2012), Article ID 913709, 5 pages
• Mutator-Like Elements with Multiple Long Terminal Inverted Repeats in Plants, Ann A. Ferguson and Ning Jiang
  Volume 2012 (2012), Article ID 695827, 14 pages
• Features of Methylation and Gene Expression in the Promoter-Associated CpG Islands Using Human Methylome Data, Xin Du, Leng Han, An-Yuan Guo, and Zhongming Zhao
  Volume 2012 (2012), Article ID 598987, 8 pages
• ArraySearch: A Web-Based Genomic Search Engine, Tyler J. Wilson and Steven X. Ge
  Volume 2012 (2012), Article ID 650842, 10 pages
• Genotype-dependent Burst of Transposable Element Expression in Crowns of Hexaploid Wheat (Triticum aestivum L.) during Cold Acclimation, Debbie Laudencia-Chingcuanco and D. Brian Fowler
  Volume 2012 (2012), Article ID 232530, 9 pages
• Genomewide Analysis of Carotenoid Cleavage Dioxygenases in Unicellular and Filamentous Cyanobacteria, Hongli Cui, Yinchu Wang, and Song Qin
  Volume 2012 (2012), Article ID 164690, 13 pages
• Evolution and Conservation of Predicted Inclusion Membrane Proteins in Chlamydiae, Erika I. Lutter, Craig Martens, and Ted Hackstadt
  Volume 2012 (2012), Article ID 362104, 13 pages
• Differential Expression ESTs Associated with Fluorosis in Rats Liver, Y. Q. He, Y. Pan, L. J. Ying, and R. Zhao
  Volume 2012 (2012), Article ID 208390, 7 pages
• High Levels of Sequence Diversity in the 5′ UTRs of Human-Specific L1 Elements, Jungnam Lee, Seyoung Mun, Thomas J. Meyer, and Kyudong Han
  Volume 2012 (2012), Article ID 129416, 8 pages
• mRNA 3′ End Processing Factors: A Phylogenetic Comparison, Sarah K. Darmon and Carol S. Lutz
  Volume 2012 (2012), Article ID 876893, 22 pages
• Comparison between Normalised and Unnormalised 454-Sequencing Libraries for Small-Scale RNA-Seq Studies, Robert Ekblom, Jon Slate, Gavin J. Horsburgh, Tim Birkhead, and Terry Burke
  Volume 2012 (2012), Article ID 281693, 8 pages
• In Silico Identification and Comparative Genomics of Candidate Genes Involved in Biosynthesis and Accumulation of Seed Oil in Plants, Arti Sharma and Rajinder Singh Chauhan
  Volume 2012 (2012), Article ID 914843, 14 pages
• Structure, Expression, and Function of ICAM-5, Heping Yang
  Volume 2012 (2012), Article ID 368938, 11 pages
• Mitochondrial DNA Variability within Uromastyx ornata philbyi (Agamidae: Squamata) from Southwestern Saudi Arabia, Sayed A. M. Amer, Mohamed M. Ahmed, Thomas M. Wilms, Mohammed Shobrak, and Yoshinori Kumazawa
  Volume 2012 (2012), Article ID 851379, 8 pages