| Ocular, genital, and LGV | CT115, CT223, CT214, CT229, CT383, CT618, CT195 |
| LGV specific | CT036, CT058, CT101, CT116, CT117, CT118, CT119, CT134, CT135, CT147, CT164, CT192, CT196, CT228, CT232, CT233, CT249, CT288, CT300, CT324, CT345, CT357, CT358, CT365, CT383, CT442, CT449, CT484, CT578, CT642, CT728, CT788, CT789, CT813,CT846 |
| Ocular specific | CT224, CT225, CT226, CT383, CT846, CT850 |
| No correlation with disease | CT005, CT006, CT079, CT227, CT440, CT565 |
| Serovar E specific clades | CT058, CT116, CT117, CT192, CT233, CT249, CT288, CT324, CT357, CT358, CT365, CT383, CT442, CT483, CT578, CT642, CT846, CT850 |
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