Genome Wide Analysis of Nucleotide-Binding Site Disease Resistance Genes in Brachypodium distachyon

Table 2

The motif sequences identified by the MEME.

NO.	Best possible match	NBS motif
1	TCLLYLSAFPEDYEIERERLVRRWIAEGF	RNBS-D
2	VRKLNVVSIVGFGGLGKTTLAKQVYDKIR	P-loop
3	CPDMFKEVSNEILKKCGGLPLAIISISSL	GLPL
4	ALYLSYDELPHHLKQCFLYCALYTEDSII	RNBS-C
5	EETAEEYYYELIHRNLLQPDG	—
6	ACRVHDMVLDLICSLSSEENF	MHDV
7	FLKDKRYLIVIDDIWSTSAWR	Kinase-2
8	NDTVRTWVKQVRDLANDVEDCLLDFVLYS	—
9	VLSIVGFGGLGKTTLAKAVYR	P-loop
10	IKCAFPDNEKGSRIIITTRNEDVANICCC	RNBS-B
11	NLRYIGLRRTNVKSLPDSIENLSNLQTLD	—
12	VSAADGALGPLLGKLATLLAEEYSRLKGVRGEIRSLKSELTSMHGALKKY	—
13	IQTIPDCIANLIHLRLLNLDGTEISCLPESIGSLINLQILN	—
14	GSFNIQAWVCVSQDYNEVSLLKEVLRNIG	RNBS-A
15	SAHPNLEIIGMEIVKKLKGLPLAAKAIGSLL	GLPL
16	PPLWQLPNLKYLRIEGAAAVTKIGPEFVG	—
17	QLRPPGNLENLWIHGFFGRRYPTWFGTTF	—
18	QGETIGELQRKLAETIEGKSFFLVLDDVW	Kinase-2
19	IYRMKPLSDDYSRRLFYKRIF	RNBS-C
20	LRTPLHATTAGVILVTTRDDQIAMRIGVEDIHRVDLMSVEVGWELLWKSM	RNBS-B

Note: The bolded sequence indicates the conserved NBS domain sequences.