TnpPred: A Web Service for the Robust Prediction of Prokaryotic Transposases

Table 2

Summary of Tnp predictions by TnpPred compared to ISsaga.

Organism	Acaryochloris marina; MBIC11017	Stenotrophomonas maltophilia; K279a
Kingdom	Bacteria	Bacteria
Class	Acaryochloris	Gammaproteobacteria
Date	May 27, 10	July 9, 10
Accession number	NC_009925	NC_010943
% G + C	47.3%	66.3%
Length (Mbp)	6.5	4.9
Confirmed total	244	46
Class A*	214	42
Class B*	30	4
Class C*	22	1
Not found by TnpPred	27	6
Number of IS families TnpPred	17	10
Total: not found + TnpPred	293	53
Number of IS families ISsaga	17	9
Total TnpPred	266	47
Total ISsaga	272	39

^*See Figure 1 for the definition of classes.