Implementation of a Parallel Protein Structure Alignment Service on Cloud

Table 1

RMSD computed by our proposed algorithm, DALI, and VAST.

Protein structure; alignment methods	Original RMSD value	The average RMSD value refined by bipartite matching	The average RMSD value after the proposed refinement algorithm
DALI	1.5767	1.5166	1.4713
VAST	1.5114	1.4664	1.4228