Research Article

Identification of Pentatricopeptide Repeat Proteins in the Model Organism Dictyostelium discoideum

Table 2

Putative homologs of D. discoideum PPR proteins in other cellular slime moulds. The presence of a homolog is noted by the NCBI protein accession number while the absence of a clear homolog is denoted by “—”. Also, indicated in the parentheses are the levels of amino acid identity/similarity (%), respectively, for each protein compared to the D. discoideum homolog as determined by end to end pairwise alignments.

D. discoideum proteinD. purpureum homologP. pallidum homologD. fasciculatum homolog

PtcAXP_003289503
(26.5/43.6)
PtcBXP_003288427
(52.9/71.2)
EFA79424
(16/22.7)
EGG14329
(32.1/49.4)
PtcCXP_003290170
(48.1/66.6)
EFA76720
(37.4/55.5)
EGG22645
(39.3/62.1)
PtcDXP_003284803
(21.7/33.1)
PtcEXP_003288663
(67.5/78.5)
EFA82229
(46.3/60.9)
EGG13534
(17.5/24.6)
PtcFXP_003294037
(49.9/64.8)
EFA79525
(27.5/50.3)
EGG15096
(29/49)
PtcGXP_003284179
(61.9/75.1)
EFA75260
(28.2/37)
EGG14213
(49.5/64.8)
PtcHXP_003286839
(24.6/41.2)
PtcIXP_003285976
(24.4/41.5)
PtcJXP_003291714
(25.6/44.5)
PtcKXP_003293255
(27.2/44.3)
PtcLXP_003286762
(25.8/42.2)