Comparative Study of Genome Divergence in Salmonids with Various Rates of Genetic Isolation

Table 4

Salvelinus malma DNA PCR-RAPD fragment sequences searched for NCBI.

Pairs of primers	PCR RAPD cloning fragment length**	Genbank Accession Numbers of homological sequences*
		Microsatellites; 5′→3′	dbEST*	Protein product***
IV + IV	555 bp		EG849746
1 + IV	568 bp		DY73125
IV + IV	463 bp		EG827041	BT_071991
1 + 1	304 bp		EG827041
IV + 1	439 bp		EG930580	NP_001133464
IV + 1	676 bp		BX086452
IV + IV	446 bp		CX357234
IV + 1	395 bp		EG935616, DW006459	XP_003198377
1 + 1	418 bp	Microsatellite; (CA)n 173–331
1 + 1	905 bp		BX663609	XM 689046
2 + VII	409 bp	Microsatellite; (GT)n 5–32
3 + 3	549 bp		EG923517	NM_001102593
3 + 3	384 bp		DQ156149	XP_001332830
3 + 3	384 bp		CB511135.
II + 3	122 bp		EU621899	XP_001336520
II + II	959 bp	Microsatellite; (GT)n 226–294	AU081124
3 + II	283 bp		CX723014
3 + II	453 bp		CU062733
3 + II	190 bp		GE828193
3 + II	130 bp		GU552297	ADV31329
IV + 3	108 bp		EG911815	XP_003385009
3 + IV	236 bp		EG911136	ACH85273
3 + IV	389 bp.	Microsatellite; (CA)n 276–329
3 + IV	413 bp		EG792115	CBX11156.
3 + IV	724 bp		CA353611
IV + 3	109 bp		EG911815	XP_001195378
3 + 3	801 bp		DW556963	ACI33792
3 + 3	496 bp		CB486060
3 + 3	412 bp		EG831541	NP_001154053
3 + 3	322 bp		BX861631	XP_003197666
IV + IV	554 bp		EG849746	NP_001167305
3 + IV	290 bp		EG915402	NP_001135251
3 + 3	638 bp		CB509929	ACO08436
3 + IV	275 bp		CA388004	NP_001133389
3 + 3	685 bp		CK898369	NP_001167187
3 + 3	414 bp		FF839690
IV + IV	254 bp		CB490887	ACO 57211; AAP58348
3 + IV	236 bp		EG911136	ACI66028
3 + 3	414 bp		EG792114	XP_001335224
3 + 3	490 bp		CB486060	ACI66769
7 + I	330 bp		EG 760735	XP_003200023
3 + IV	281 bp		BX861631	NP_001187967

 *Only the first homological sequence from different libraries is exhibited.
**The lengths of cloning PCR fragments are given without considering primers.
***Translation performed by EMBOSS transeq (Sequence Translation Sites) of EBI-EMBL.