Research Article

The WRKY Transcription Factor Genes in Lotus japonicus

Table 1

WRKY family genes in Lotus japonicus genome.

Annotation IDaGene nameGroupChrLocationAnnotation IDaGene nameGroupChrLocation

CM0012.480.r2.aLjWRKY1I158,226,335 CM0432.2010.r2.d LjWRKY37 IIx 4 7,529,554
CM0032.140.r2.d LjWRKY2IIc117,061,228 CM0536.110.r2.dLjWRKY38IId413,585,366
CM0032.170.r2.dLjWRKY3IIc117,093,440 CM1622.200.r2.a LjWRKY39IIc437,600,439
CM0105.740.r2.a LjWRKY4III165,847,050 CM0040.550.r2.d LjWRKY40 IIa 5 5,190,496
CM0122.1300.r2.m LjWRKY5IIb162,472,860 CM0040.670.r2.d LjWRKY41 IIa 5 5,268,779
CM0122.2160.r2.d LjWRKY6IIe163,001,936 CM0239.70.r2.d LjWRKY42IIc525,979,555
CM0123.240.r2.mLjWRKY7IIb16,329,403 CM0852.250.r2.d LjWRKY43IId52,801,268
CM0133.780.r2.mLjWRKY8IIc123,799,861 CM1574.880.r2.m LjWRKY44IId518,726,557
CM0147.250.r2.m LjWRKY9IIc142,532,993 CM0037.660.r2.m LjWRKY45I614,396,956
CM0315.160.r2.m LjWRKY10IIb135,572,836 CM1034.270.r2.dLjWRKY46IIe619,990,091
CM0320.110.r2.d LjWRKY11III115,934,171 LjT11E14.30.r2.m LjWRKY47I69,459,959
CM0433.90.r2.d LjWRKY12IIa124,711,963 LjT46F23.30.r2.d LjWRKY48IId617,672,968
CM1413.480.r2.d LjWRKY13 I 1 34,039,015 LjSGA_012799.2 LjWRKY49 IIc nd nd
CM1413.70.r2.d LjWRKY14IIe133,660,455 LjSGA_014003.1 LjWRKY50 I nd nd
CM0058.50.r2.m LjWRKY15I234,643,392 LjSGA_015261.1 LjWRKY51 I nd nd
CM0060.250.r2.a LjWRKY16III231,851,611 LjSGA_020468.1 LjWRKY52Indnd
CM0120.570.r2.d LjWRKY17IIc220,356,545 LjSGA_021425.1 LjWRKY53IIIndnd
CM0191.300.r2.a LjWRKY18I243,680,266 LjSGA_025444.2 LjWRKY54IIendnd
CM0608.50.r2.mLjWRKY19IIx220,505,843 LjSGA_038153.1LjWRKY55ndndnd
CM0608.70.r2.mLjWRKY20IIc220,514,487 LjSGA_038411.1 LjWRKY56ndndnd
CM1895.20.r2.mLjWRKY21III234,148,852 LjSGA_046833.1 LjWRKY57IIandnd
LjB06N21.120.r2.a LjWRKY22IIb242,171,450 LjSGA_050544.1 LjWRKY58ndndnd
CM0243.470.r2.mLjWRKY23IIb339,562,863 LjSGA_055568.1 LjWRKY59IIendnd
CM0936.60.r2.d LjWRKY24I318,082,486 LjSGA_058050.1 LjWRKY60 IIe nd nd
LjT41F16.60.r2.dLjWRKY25III333,152,607 LjSGA_058052.1 LjWRKY61ndndnd
LjT45M09.130.r2.dLjWRKY26IIa3474,491 LjSGA_066036.1 LjWRKY62ndndnd
CM0004.1290.r2.m LjWRKY27III440,133,355 LjSGA_069579.1 LjWRKY63 IIc nd nd
CM0004.880.r2.dLjWRKY28IIe439,837,881 LjSGA_074792.1LjWRKY64IIendnd
CM0007.1120.r2.a LjWRKY29IIc43,358,814 LjSGA_084767.1 LjWRKY65ndndnd
CM0046.1360.r2.d LjWRKY30IIe436,250,655 LjSGA_086809.1LjWRKY66ndndnd
CM0179.130.r2.m LjWRKY31I428,951,362 LjSGA_091481.1 LjWRKY67ndndnd
CM0227.580.r2.m LjWRKY32I410,519,027 LjSGA_107504.1LjWRKY68ndndnd
CM0244.860.r2.m LjWRKY33IId430,871,468 LjSGA_116672.1LjWRKY69ndndnd
CM0333.340.r2.d LjWRKY34IIc432,856,509 LjT10P12.70.r2.d LjWRKY70IIbndnd
CM0333.510.r2.a LjWRKY35IIc432,985,615 LjT45D24.80.r2.d LjWRKY71IIbndnd
CM0337.220.r2.d LjWRKY36IIb43,852,684

Annotation IDs are from miyakogusa website http://www.kazusa.or.jp/lotus/.
Italics indicated pseudogenes.
Chr: chromosome.
nd: nondetermined.
LjWRKY, WRKY genes of Lotus japonicas.