Research Article
The WRKY Transcription Factor Genes in Lotus japonicus
Table 3
Consensus sequences of WRKY motif in Lotus japonicus proteins.
| Motif | Width | Consensus sequencesa |
|
Motif1 | 29 | ILDDGYRWRKYGQKVIKGNPYPRSYYRCT | Motif2 | 29 | PGCPVKKHVERSAEDPSMVITTYEGEHNH | Motif3 | 21 | WRKYGQKVVKGSPFPRSYYKC | Motif4 | 21 | RSLDGHVTEITYKGxHNCPKP | Motif5 | 15 | VREPRVAVQTKSEVD | Motif6 | 28 | LVEAMAAALTADPNFTAALAAAISSIIG | Motif7 | 39 | EELERLNAENKKLREMLDQMNENYNALQMHLVELMQKQK | Motif8 | 26 | PAAMAMASTTSAAASMLLSGSMPSAD | Motif9 | 11 | HPNCPAKKKVE | Motif10 | 113 | QNLQVQNFQNQNVQQAAPSFSTTPSFNAATPVPPISYRNAIIPLPFNVANPAPNTH FNTSSFGSFLQGINGVDFVQSSRFMANNNQGLLRNNGLLQDMFVPAHMEFGGGGGRR | Motif11 | 24 | CSASMATLSASAPFPTITLDLTQS | Motif12 | 42 | DITEIISAPTSVTNSPILDLDLLDNVELDSNFPFNTPELFS | Motif13 | 15 | KKRKMRVKRTVRVPA | Motif14 | 91 | MPPPPPSPPLPPLSPLPLPPFHQQTSSFGSFKDLLTIEDFDPALFD WNPTTTTNTAAAADVTSPPLFTTQISHPVPSPATSNILPEDSFDV | Motif15 | 27 | SGGGELDDDEPDAKRWKGEGENDGYSA | Motif16 | 15 | LLLNRTGHARFRRAP | Motif17 | 26 | MEHLHKWEQKALINELIQGMELARKL | Motif18 | 14 | MDDDWDLHAVVRGC | Motif19 | 19 | MSVMPEFLQQGLNSSPVNV | Motif20 | 39 | QCSGDIEGELTGEAMELGGEKAIESARALLSIGFEIKPC |
|
|
Consensus amino acid sequence was derived from MEME program.
|