International Journal of Genomics

Research Article

In Silico Prediction of T and B Cell Epitopes of Der f 25 in Dermatophagoides farinae

Table 3

The results of B and T cell epitopes predictions.


	Tools	Location of the prediction results

B cell epitope prediction	DNAStar protean	11–19, 28–35, 68–77, 95–111, 130–139, 173–187, 193–197, 211–225.
	BPAP	20–26, 32–52, 54–70, 86–93, 138–168, 175–209, 218–242.
	BepiPred	11–18, 30–34, 71–78, 99–107, 132–138, 168–183, 194–199, 210–224.

T cell epitope prediction (HLA-DR)	DRB1*01:01	5–13, 11–19, 10–18, 13–21, 24–32, 26–34, 39–47, 46–54, 50–58, 53–61, 57–65, 58–66, 60–68, 66–74, 73–81, 82–90, 89–97, 90–98, 104–112, 107–115, 114–122, 119–127, 122–130, 143–151, 142–150, 156–164, 157–165, 161–169, 163–171, 167–175, 187–195, 190–198, 191–199, 195–203, 197–205, 203–211, 205–213, 227–235, 228–236, 232–240, 235–243, 239–247.
	DRB3*01:01	53–61, 66–74, 81–89, 191–199.
	DRB4*01:01	26–34, 38–46, 46–54, 48–56, 50–58, 107–115, 142–150, 158–166, 160–168, 238–246, 239–247.
	DRB5*01:01	5–13, 11–19, 13–21, 20–28, 24–32, 26–34, 39–47, 46–54, 59–67, 66–74, 73–81, 89–97, 90–98, 143–151, 146–154, 150–158, 163–171, 165–173, 166–174, 203–211, 228–236, 238–246, 239–247.

T cell epitope prediction (HLA-DQ)	HLA-DQA10101-DQB10501	153–161, 154–162, 159–167, 160–168.
	HLA-DQA10102-DQB10602	33–41, 40–48, 42–50, 57–65, 77–85, 117–125, 154–162, 192–200, 206–214, 213–221, 230–238, 237–245.
	HLA-DQA10501-DQB10201	19–27, 39–47, 37–45, 82–90, 100–108, 112–120, 122–130, 126–134, 158–166, 195–203, 220–228.
	HLA-DQA10501-DQB10301	6–14, 34–42, 38–46, 39–47, 58–66, 66–74, 69–77, 72–80, 74–82, 77–85, 82–90, 85–93, 107–115, 117–125, 121–129, 133–141, 161–169, 166–174, 167–175, 169–177, 172–180, 192–200, 195–203, 203–211, 205–213, 206–214, 207–215, 213–221, 215–233, 228–236, 230–238, 232–240, 237–245.