Identification and Expression Profiling of the BTB Domain-Containing Protein Gene Family in the Silkworm, Bombyx mori

Table 1

Inventory of BTB protein genes in the silkworm genome.

Subfamily	Proposed name	SilkDB ID	KAIKObase ID	Amino acid residues; (aa)	Molecular weight; (Da)	PI	Subcellular localization	Domain	Chromosome
BTB only	BTBD1	BGIBMGA000517	Gene000396	1812	200095	6.01	nucl	BTB	1
	BTBD2	BGIBMGA012231	Gene000660	351	38870	10.06	mito	BTB	1
	BTBD3	BGIBMGA002026	Gene000081	413	46323	8.62	mito	BTB	1
	BTBD4	BGIBMGA007329	Gene001228	229	25941	5.91	nucl	BTB	3
	BTBD5	BGIBMGA002966	Gene002082	450	52799	5.87	cyto	BTB	4
	BTBD6	BGIBMGA003094	Gene002316	366	40210	8.33	cyto	BTB	4
	BTBD7	BGIBMGA006426	Gene003326	412	45681	5.00	nucl	BTB	6
	BTBD8	BGIBMGA006356	Gene003489	417	48190	6.13	cyto	BTB	6
	BTBD9	BGIBMGA008687	Gene004103	288	31902	8.08	nucl	BTB	7
	BTBD10	No	Gene005182	787	88357	4.89	nucl	BTB	9
	BTBD11	BGIBMGA001715	Gene006003	517	56039	9.12	nucl	BTB	11
	BTBD12	BGIBMGA009340	Gene008379	340	39122	6.04	cyto	BTB	14
	BTBD13	BGIBMGA007642	Gene008555	361	41882	5.21	cyto	BTB	15
	BTBD14	BGIBMGA007941	Gene008559	252	29069	5.18	cyto	BTB	15
	BTBD15	No	Gene016199	128	14575	7.73	cyto	BTB	15
	BTBD16	BGIBMGA001575	Gene012166	1367	155410	4.96	nucl	BTB	21
	BTBD17	BGIBMGA011238	Gene013474	538	61092	6.06	mito	BTB	23
	BTBD18	No	Gene013871	379	42044	8.04	nucl	BTB	24
	BTBD19	BGIBMGA000033	Gene015082	287	33573	5.96	cyto	BTB	26
	BTBD20	BGIBMGA014444	Gene016272	118	13280	8.96	cyto	BTB	Unknown
	BTBD21	BGIBMGA011597	Gene016080	182	19966	5.69	nucl	BTB	Unknown
BTB-ANK	ABTB1	BGIBMGA001072	Gene008052	1133	120246	8.21	nucl	ANK-BTB	13
	ABTB2	BGIBMGA004120	Gene011234	1236	139090	8.25	nucl	ANK-BTB	19
BTB-BACK	BBTB1	BGIBMGA006106	Gene001734	593	66528	5.74	cyto	BTB-BACK	4
	BBTB2	BGIBMGA013583	Gene003242	514	59279	5.85	nucl	BTB-BACK	6
	BBTB3	BGIBMGA005281	Gene004340	359	40022	7.03	nucl	BTB-BACK	8
	BBTB4	BGIBMGA002863	No	669	75503	5.42	cyto	BTB-BACK	10
	BBTB5	BGIBMGA011825	Gene006515	405	44924	5.43	nucl	BTB-BACK	11
BTB-BACK-PHR	BBP1	BGIBMGA007155	Gene012272	505	56012	5.47	cyto	BTB-BACK-PHR	21
	BBP2	BGIBMGA005139	Gene014633	535	59037	5.44	cyto/m	BTB-BACK-PHR	25
BTB-BACK-Kelch	BBK1	BGIBMGA007372	Gene001129	612	65335	5.09	cyto	BTB-BACK-Kelch	3
	BBK2	BGIBMGA006093	Gene001685	646	71864	8.00	nucl	BTB-BACK-Kelch	4
	BBK3	BGIBMGA011859	Gene006441	628	71412	7.44	nucl	BTB-BACK-Kelch	11
	BBK4	BGIBMGA010339	Gene007321	686	77416	5.23	cyto/m	BTB-BACK-Kelch	12
	BBK5	BGIBMGA004699	Gene012782	524	58082	8.53	nucl	BTB/BACK/Kelch	22
	BBK6	BGIBMGA011506	Gene013128	611	66894	5.90	cyto	BTB/BACK/Kelch	23
BTB-Kelch	KBTB	BGIBMGA012932	Gene009636	798	90009	6.23	cyto	BTB-Kelch	16
BTB-ZF (C2H2)	ZBTB1	BGIBMGA002080	Gene000027	370	42226	6.44	nucl	BTB-C2H2 zinc finger	1
	ZBTB2	BGIBMGA002948	Gene002051	269	30496	5.41	nucl	BTB-C2H2 zinc finger	4
	ZBTB3	BGIBMGA003766	Gene002371	914	99826	8.50	nucl	BTB-C2H2 zinc finger	4
	ZBTB4	BGIBMGA002702	Gene002544	563	62824	6.79	nucl	BTB-C2H2 zinc finger	5
	ZBTB5	BGIBMGA006492	Gene003412	269	30293	6.78	nucl	BTB-C2H2 zinc finger	6
	ZBTB6	BGIBMGA009907	Gene004719	456	50728	7.74	nucl	BTB-C2H2 zinc finger	8
	ZBTB7	BGIBMGA012517	Gene005005	581	65916	5.97	nucl	BTB-C2H2 zinc finger	9
	ZBTB8	BGIBMGA006736	Gene005448	435	48049	6.02	nucl	BTB-C2H2 zinc finger	10
	ZBTB9	BGIBMGA007530	Gene009012	535	59636	6.01	nucl	BTB-C2H2 zinc finger	15
	ZBTB10	BGIBMGA010850	Gene012859	705	77364	6.55	nucl	BTB-C2H2 zinc finger	22
	ZBTB11	BGIBMGA000316	Gene012612	464	51255	6.25	nucl	BTB-C2H2 zinc finger	22
	ZBTB12	BGIBMGA000376	No	511	58344	9.08	nucl	BTB-C2H2 zinc finger	22
	ZBTB13	No	Gene015971	292	33373	9.27	nucl	BTB-C2H2 zinc finger	Unknown
BTB-ZF (FLYWCH)	ZBTB14	BGIBMGA005898	Gene007418	299	33425	8.78	cyto	BTB-FLYWCH zinc finger	12
	ZBTB15	BGIBMGA005879	Gene007419	338	38692	4.90	cyto	BTB-FLYWCH zinc finger	12
	ZBTB16	No	Gene007155	389	44521	6.32	cyto	BTB-FLYWCH zinc finger	12
BTB-HTH	HBTB1	BGIBMGA008942	Gene001524	503	56414	8.67	nucl	BTB-HTH DNA binding motif	3
	HBTB2	BGIBMGA001210	Gene007758	516	57152	8.61	nucl	BTB-HTH DNA binding motif	13
MATH-BTB	MBTB	BGIBMGA012495	Gene005056	434	48266	7.07	nucl	MATH-BTB	9

Note: cyto: cytosol; nucl: nuclear; mito: mitochondrion; m: mitochondrion.