Research Article

Coexpression Analysis of Transcriptome on AIDS and Other Human Disease Pathways by Canonical Correlation Analysis

Table 1

Human disease pathway in KEGG.

ClassesIDPathways

Cancers: overview5200Pathways in cancer
5202Transcriptional misregulation in cancer
5203Viral carcinogenesis
5204Chemical carcinogenesis
5205Proteoglycans in cancer
5206MicroRNAs in cancer

Cancers: specific types5210Colorectal cancer
5211Renal cell carcinoma
5212Pancreatic cancer
5213Endometrial cancer
5214Glioma
5215Prostate cancer
5216Thyroid cancer
5217Basal cell carcinoma
5218Melanoma
5219Bladder cancer
5220Chronic myeloid leukemia
5221Acute myeloid leukemia
5222Small cell lung cancer
5223Non-small-cell lung cancer

Immune diseases5310Asthma
5320Autoimmune thyroid disease
5321Inflammatory bowel disease (IBD)
5322Systemic lupus erythematosus
5323Rheumatoid arthritis
5330Allograft rejection
5332Graft-versus-host disease
5340Primary immunodeficiency

Neurodegenerative diseases5010Alzheimer’s disease
5012Parkinson’s disease
5014Amyotrophic lateral sclerosis (ALS)
5016Huntington’s disease
5020Prion diseases

Substance dependence5030Cocaine addiction
5031Amphetamine addiction
5032Morphine addiction
5033Nicotine addiction
5034Alcoholism

Cardiovascular diseases5410Hypertrophic cardiomyopathy (HCM)
5412Arrhythmogenic right ventricular cardiomyopathy (ARVC)
5414Dilated cardiomyopathy
5416Viral myocarditis

Endocrine and metabolic diseases4930Type II diabetes mellitus
4940Type I diabetes mellitus
4950Maturity onset diabetes of the young

Infectious diseases: bacterial5100Bacterial invasion of epithelial cells
5110Vibrio cholerae infection
5120Epithelial cell signaling in Helicobacter pylori infection
5130Pathogenic Escherichia coli infection
5131Shigellosis
5132Salmonella infection
5133Pertussis
5134Legionellosis
5150Staphylococcus aureus infection
5152Tuberculosis

Infectious diseases: viral5160Hepatitis C
5161Hepatitis B
5162Measles
5164Influenza A
5166HTLV-I infection
5168Herpes simplex infection
5169Epstein-Barr virus infection

Infectious diseases: parasitic5140Leishmaniasis
5142Chagas disease (American trypanosomiasis)
5143African trypanosomiasis
5144Malaria
5145Toxoplasmosis
5146Amoebiasis