Research Article
Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing
Table 4
Structural variations detected in the genomes of 20 greater amberjack.
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Structural variations were detected by BreakDancer using pair-end resequenced data for 20 greater amberjack genomes. Sample numbers 1–8 represent greater amberjacks captured near the Kochi coast, and sample numbers 9–20 represent greater amberjacks captured near Chinese Hainan Islands. The Ig numbers are the resequenced data analysis numbers. DEL: deletion; INS: insertion; INV: inversion; ITX: intrachromosomal translocation; and CTX: interchromosomal translocation. |