Genome-Wide Identification and Analysis of the Cytochrome B5 Protein Family in Chinese Cabbage (Brassica rapa L. ssp. Pekinensis)
Table 2
Chinese cabbage BrCB5 gene family. BrCB5 a to o were assigned according to their distribution in the genome. The GC content was calculated by DNASTAR (Madison, WI, USA). The number of amino acids, molecular weight (MW), and theoretical isoelectric point (pI) were computed by the ProtParam tool (http://web.expasy.org/protparam/). The rest of data were downloaded from the Brassica database (http://brassicadb.org).
Gene
Accession no.
Chr. (strand)
Start/stop codon
CDS (bp)
GC content (%)
Length (aa)
MW (kDa)
pl
BrCB5a
Bra031489
A01(-)
16850047/16850412
366
41.53
121
13.49
5.26
BrCB5b
Bra023636
A02(-)
3272221/3274222
756
42.28
251
27.89
8.27
BrCB5c
Bra022660
A02(-)
7173079/7173774
405
44.69
134
15.05
4.97
BrCB5d
Bra006419
A03(-)
3427963/3429928
849
44.41
282
31.37
8.23
BrCB5e
Bra029062
A03(-)
6128228/6129069
357
43.14
118
13.52
6.64
BrCB5f
Bra022898
A03(-)
7650181/7651235
405
41.98
134
15.10
5.49
BrCB5g
Bra021809
A04(-)
14736345/14737749
405
42.72
134
15.07
5.13
BrCB5h
Bra039268
A04(+)
18924993/18925595
405
42.96
134
15.14
5.92
BrCB5i
Bra004518
A05(-)
595853/596423
405
40.49
134
15.07
5.68
BrCB5j
Bra005564
A05(+)
6249749/6251132
405
42.22
134
15.07
5.12
BrCB5k
Bra037461
A06(-)
20209973/20210752
417
49.88
138
14.96
4.53
BrCB5l
Bra036160
A09(+)
2148955/2149735
423
43.03
140
15.06
4.73
BrCB5m
Bra027144
A09(+)
9193855/9195418
606
24.59
201
23.21
5.51
BrCB5n
Bra024721
A09(+)
24567294/24567999
408
46.57
135
15.25
4.56
BrCB5o
Bra002104
A10(+)
11488694/11490486
846
45.86
281
31.24
7.68
Length, WM, and pI refer to the translated BrCB5 proteins.
