Research Article
Comparative Genome Characterization of a Petroleum-Degrading Bacillus subtilis Strain DM2
Table 5
List of proteins involve in degradation of petroleum compounds.
| Protein ID | Swissprot references | Swissprot closest homolog | Swissprot similarity % | KO | Gene name/enzyme |
| AXF32711 | spo31669.1 | Acireductone dioxygenase | 100 | K08967 | mtnD, mtnZ, ADI1 | AXF32173 | spp40402.2 | Alkanesulfonate monooxygenase | 100 | K04091 | ssuD | AXF32337 | spo07561.1 | Aromatic compound monooxygenase | 99 | None | _ | AXF34322 | spo34627.1 | Blue-light photoreceptor | 99 | None | _ | AXF32118 | spP54720.1 | Catechol-2,3-dioxygenase | 99 | None | _ | AXF32119 | spp54721.2 | Catechol-2,3-dioxygenase | 99 | K07104 | _ | AXF34401 | spo32085.1 | Cysteine dioxygenase | 97 | None | _ | AXF35528 | spp53554.1 | Cytochrome P450 | 98 | K16593 | bioI | AXF34015 | spo08336.1 | Cytochrome P450 CYP102A3 | 99 | K14338 | cypD_E, CYP102A2_3 | AXF31825 | spo34653.1 | Fatty acid desaturase | 82 | K10255 | FAD6, desA | AXF33257 | spo34653.1 | Fatty acid desaturase | 100 | K10255 | FAD6, desA | AXF31559 | spo31440.1 | Fatty acid peroxygenase | 100 | K15629 | CYP152A1 | AXF32654 | spp49852.1 | Flavohemoprotein | 100 | K05916 | hmp, YHB1 | AXF32298 | spp38049.1 | Heme-degrading monooxygenase | 99 | None | _ | AXF35412 | spo31534.2 | Heme-degrading monooxygenase | 100 | K07145 | isdG, isdI | AXF33211 | spc0SPC0.1 | Probable 4-hydroxyphenylacetate 3-monooxygenase | 100 | K00483 | hpaB | AXF34426 | spo05239.1 | Probable NADH-dependent butanol dehydrogenase 1 | 100 | K00100 | E1.1.1.- | AXF34427 | spo05240.1 | Probable NADH-dependent butanol dehydrogenase 2 | 100 | None | _ | AXF33973 | spo05413.1 | Probable nitronate monooxygenase | 99 | K00459 | ncd2, npd | AXF32025 | spo08394.1 | Putative cytochrome P450 CYP102A2 | 99 | K14338 | cypD_E, CYP102A2_3 | AXF32565 | spo34374.1 | Putative cytochrome P450 YjiB | 99 | K00517 | E1.14.-.- | AXF32015 | spo31535.1 | Putative lyase/dioxygenase | 100 | None | _ | AXF31633 | spo34504.2 | Putative monooxygenase | 99 | None | _ | AXF31730 | spp94425.1 | Putative monooxygenase | 100 | None | _ | AXF34230 | spo34846.1 | Putative monooxygenase | 99 | None | _ | AXF35096 | spp39606.1 | Putative monooxygenase | 99 | None | _ | AXF35236 | spp54950.1 | Putative monooxygenase | 100 | None | _ | AXF34689 | spo32254.1 | Putative monooxygenase | 100 | None | _ | AXF34228 | spo34974.1 | Putative monooxygenase MoxC | 99 | None | _ | AXF31862 | spp96693.1 | Putative ring-cleaving dioxygenase | 100 | K15975 | _ | AXF32639 | spo34689.1 | Putative ring-cleaving dioxygenase MhqA | 100 | K15975 | _ | AXF33297 | spo34543.1 | Putative ring-cleaving dioxygenase MhqE | 99 | K15975 | _ | AXF35280 | spp42106.2 | Quercetin 2,3-dioxygenase | 99 | K07155 | E1.13.11.24 |
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