Research Article
In Silico Conformational Analysis of the Short-Sequence Hypomurocin A Peptides
Table 3
Populations (in %) of the conformers characterized by the different helical contents for the HM A peptides.
| Helicity | HM A-1 | HM A-2 | HM A-3 | HM A-4 | HM A-5 | HM A-5a |
| 310-helical content | 0% | 3.6 | 3.7 | 3.8 | 3.1 | 4.1 | 2.5 | 10% | 14.4 | 15.2 | 15.2 | 14.9 | 15.5 | 14.8 | 20% | 25.8 | 23.2 | 26.3 | 28.2 | 24.9 | 24.5 | 30% | 26.2 | 24.0 | 25.4 | 24.6 | 28.3 | 26.0 | 40% | 18.7 | 18.8 | 17.5 | 17.8 | 16.2 | 19.0 | 50% | 7.6 | 10.2 | 7.4 | 8.7 | 7.7 | 9.6 | 60% | 2.3 | 3.7 | 3.5 | 2.4 | 2.6 | 2.7 | 70% | 1.2 | 1.1 | 0.7 | 0.2 | 0.6 | 0.9 | 80% | 0.2 | 0.1 | 0.2 | 0.1 | 0.1 | 0.0 |
| -helical content | 0% | 22.5 | 14.9 | 23.8 | 23.0 | 21.0 | 19.2 | 10% | 39.4 | 33.6 | 35.6 | 37.5 | 39.7 | 37.5 | 20% | 24.5 | 27.7 | 29.1 | 27.3 | 27.3 | 27.4 | 30% | 10.1 | 17.2 | 9.5 | 9.7 | 8.8 | 12.3 | 40% | 3.1 | 4.6 | 1.4 | 2.1 | 2.8 | 2.7 | 50% | 0.3 | 1.7 | 0.5 | 0.3 | 0.4 | 0.8 | 60% | 0.1 | 0.3 | 0.1 | 0.1 | 0.0 | 0.1 |
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