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International Journal of Plant Genomics
Table of Contents
Special Issues
International Journal of Plant Genomics
/
2008
/
Article
/
Tab 4
/
Review Article
Bioinformatic Tools for Inferring Functional Information from Plant Microarray Data: Tools for the First Steps
Table 4
Other useful statistical analysis and data-mining tools.
Tool name
Web site
Amiada (analyzing microarray data)
http://dambe.bio.uottawa.ca/amiada.asp
[
39
]
ArrayAssist Enterprise
http://www.stratagene.com/
caGEDA
http://bioinformatics.upmc.edu/GE2/GEDA.html
Cluster
http://rana.lbl.gov/EisenSoftware.htm
dChip
http://www.dchip.org/
GeneMaths XT
http://www.applied-maths.com/genemaths/genemaths.htm
INCLUSive
http://homes.esat.kuleuven.be/~dna/Biol/Software.html
J-Express Pro
http://www.molmine.com/software.htm
MAExplorer
http://maexplorer.sourceforge.net/
NIA Array analysis
http://lgsun.grc.nia.nih.gov/ANOVA/
Onto-Tools
http://vortex.cs.wayne.edu/projects.htm
Probe Profiler
http://www.corimbia.com/Pages/ProductOverview.htm
TableView
http://ccgb.umn.edu/software/java/apps/TableView/
Venn Mapper
http://www.gatcplatform.nl//vennmapper/index.php