STIFDB—Arabidopsis Stress Responsive Transcription Factor DataBase

Table 1

Table of transcription factors considered.

No.	Family name	Subfamily	Stress signal	Reference (Stress signal)	Name of the Cis-element	Cis-element	Reference (Cis-element)
1	ABI3/VP1		ABA	Plant J. 2000; 24(1): 57–66	distB ABRE	GCCACTTGTC	Plant J. 2000; 24(1): 57–66
2	AP2/EREBP	EREBP-ERF	Cold, Drought	The Plant Cell, 1998; 10: 1391–1406.	GCC-box	GCCGCC	The Plant Cell, 1998; 10: 1391–1406.
		DREB	Cold, Drought	Proc. Natl. Acad. Sci., 1997; 94: 1035–1040	CRT/DRE	(A/G)CCGAC	Proc. Natl. Acad. Sci., 1997, 94: 1035–1040
3	ARF		Auxin	PNAS, 1999; 96(10): 5844-9	AuxREs	TGTCTC	PNAS, 1999; 96(10): 5844-9
4	BHLH/myc		NaCl, ABA, Drought	The Plant Cell, 2003; 15: 63–78	N box	CACG(G/A)C	The Plant Cell, 2003; 15: 63–78
					G box	CACGTG	The Plant Cell, 2003; 15: 1749–1770
5	bZIP		ABA, Drought	Current Opinion in Plant Biology 2000; 3: 217–223	G box1	CCACGTGG	The Plant Cell, 1992; 4: 1309–1319
					G box2	TGACG(T/C)	The Plant Cell, 1992; 4: 1309–1319
					G/ABRE	(C/T)ACGTGGC	Journal Of Biological Chemistry, 2000; 275(3): 1723–1730
					C/ABRE	CGCGTG	Journal Of Biological Chemistry, 2000; 275(3): 1723–1730
6	HB		ABA, Drought	Plant Molecular Biology, 1998; 37: 377–384.		CAATNATTG	Nat. Struct Biol, 1999; 6: 464–470
7	HSF		Drought, Cold, Heavy-metal stress and oxidative stress	Plant Physiol. 1998; 117: 1135–1141	HSE	TTCNNGAAGAANNTTC	Nat. Struct Biol, 1999; 6: 464–470
8	MYB		Dehydration, Wounding	The Plant Cell, 1993; 5: 1529–1539		(T/C)AAC(G/T) G	Genes & Dev.;1990; 4: 2235–2241
						CC(T/A)ACC	Genetics, 1998; 149: 479–490.
						TAACTG	Plant Journal, 1996; 10(6): 1145–1148
						CC(TA)AACC	Genetics, 1998; 149: 479–490.
						(C/T)AACN(A/G)	The Plant Journal, 2003; 33: 259–270
9	NAC		Drought, high salinity and ABA	The Plant Cell, 2004; 16: 2481–2498.		CATGTG	Plant Mol Biol.; 2002; 50(2): 237–48.
10	WRKY		Biotic stress (pathogen attack)	Plant Physiology, 2002, 129: 661–677	W box	(T)TGAC(C/T)	Plant Molecular Biology; 51: 21–37, 2003.
			Abiotic stress (wind, rain, hail)