Table 1: Table of transcription factors considered.

No.Family nameSubfamilyStress signalReference (Stress signal)Name of the Cis-elementCis-elementReference (Cis-element)

1ABI3/VP1ABAPlant J. 2000; 24(1): 57–66distB ABREGCCACTTGTCPlant J. 2000; 24(1): 57–66

2AP2/EREBPEREBP-ERFCold, DroughtThe Plant Cell, 1998; 10: 1391–1406.GCC-boxGCCGCCThe Plant Cell, 1998; 10: 1391–1406.
DREBCold, DroughtProc. Natl. Acad. Sci., 1997; 94: 1035–1040CRT/DRE(A/G)CCGACProc. Natl. Acad. Sci., 1997, 94: 1035–1040

3ARFAuxinPNAS, 1999; 96(10): 5844-9AuxREsTGTCTCPNAS, 1999; 96(10): 5844-9

4BHLH/mycNaCl, ABA, DroughtThe Plant Cell, 2003; 15: 63–78N boxCACG(G/A)CThe Plant Cell, 2003; 15: 63–78
G boxCACGTGThe Plant Cell, 2003; 15: 1749–1770

5bZIPABA, DroughtCurrent Opinion in Plant Biology 2000; 3: 217–223G box1CCACGTGGThe Plant Cell, 1992; 4: 1309–1319
G box2TGACG(T/C)The Plant Cell, 1992; 4: 1309–1319
G/ABRE(C/T)ACGTGGCJournal Of Biological Chemistry, 2000; 275(3): 1723–1730
C/ABRECGCGTGJournal Of Biological Chemistry, 2000; 275(3): 1723–1730

6HBABA, DroughtPlant Molecular Biology, 1998; 37: 377–384.CAATNATTGNat. Struct Biol, 1999; 6: 464–470

7HSFDrought, Cold, Heavy-metal stress and oxidative stressPlant Physiol. 1998; 117: 1135–1141HSETTCNNGAAGAANNTTCNat. Struct Biol, 1999; 6: 464–470

8MYBDehydration, WoundingThe Plant Cell, 1993; 5: 1529–1539(T/C)AAC(G/T) GGenes & Dev.;1990; 4: 2235–2241
CC(T/A)ACCGenetics, 1998; 149: 479–490.
TAACTGPlant Journal, 1996; 10(6): 1145–1148
CC(TA)AACCGenetics, 1998; 149: 479–490.
(C/T)AACN(A/G)The Plant Journal, 2003; 33: 259–270

9NACDrought, high salinity and ABAThe Plant Cell, 2004; 16: 2481–2498.CATGTGPlant Mol Biol.; 2002; 50(2): 237–48.

10WRKYBiotic stress (pathogen attack)Plant Physiology, 2002, 129: 661–677W box(T)TGAC(C/T)Plant Molecular Biology; 51: 21–37, 2003.
Abiotic stress (wind, rain, hail)