Research Article

Comparative Genomics in Perennial Ryegrass (Lolium perenne L.): Identification and Characterisation of an Orthologue for the Rice Plant Architecture-Controlling Gene OsABCG5

Table 2

Putative perennial ryegrass ABCG genes identified through transcriptome sequencing. Highest-matching genes in rice are shown as candidate orthologues, with E values indicating level of similarity with the perennial ryegrass sequences.

Sequence nameTissueCandidate rice orthologueE value
TIGR UIRAP-DB UI

LpABCG1_candLeafLOC_01g03144Os01g01216003.00E−72
LpABCG9_candLeafLOC_04g44610Os04g05283004.00E−37
LpABCG12_candLeafLOC_05g13520Os05g02222002.00E−29
LpABCG16_candLeaf, AntherLOC_06g51460Os06g07312003.00E−129
LpABCG18_candLeafLOC_08g07010Os08g01670005.00E−36
LpABCG25_candPistilLOC_10g30610Os10g04429005.00E−66
LpABCG26_candAntherLOC_10g35180Os10g04943008.00E−104
LpABCG27_candLeafLOC_11g07600Os11g01774006.00E−54
LpABCG28_candAntherLOC_11g22350Os11g04169008.00E−68
LpABCG30_candLeafLOC_12g22284Os12g04117002.00E−78
LpABCG31_candAntherLOC_01g08260Os01g01779006.00E−24
LpABCG41_candLeafLOC_02g32690Os02g05289005.00E−48
LpABCG45_candAntherLOC_08g43120Os08g05444001.00E−42
LpABCG47_candPistilLOC_09g16380Os09g03330004.00E−40