Local Assemblies of Paired-End Reduced Representation Libraries Sequenced with the Illumina Genome Analyzer in Maize

Table 3

Contig alignment to the B73 reference genome. The number of contigs uniquely aligned to the B73 reference genome assembly and exhibiting 0, 1, or 2 mismatches in relation to the reference are shown.

Number of contigs	B73	B14
0 mismatch	22,436	42,279
1 mismatch	4,142	11,875
2 mismatches	4,185	8,370
Total	30,763	62,524