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Citations to this Journal [1,541 citations: 1–100 of 1,475 articles]

Articles published in International Journal of Plant Genomics have been cited 1,541 times. The following is a list of the 1,475 articles that have cited the articles published in International Journal of Plant Genomics.

  • Ying Zhang, Dario Bottinelli, Frédérique Lisacek, Jeremy Luban, Caterina Strambio De Castillia, Emmanuel Varesio, and Gérard Hopfgartner, “Optimization of human dendritic cell sample preparation for mass spectrometry-based proteomics studies,” Analytical Biochemistry, 2015. View at Publisher · View at Google Scholar
  • G. C. M. Moreira, T. F. Godoy, C. Boschiero, A. Gheyas, G. Gasparin, S. C. S. Andrade, M. Paduan, H. Montenegro, D. W. Burt, M. C. Ledur, and L. L. Coutinho, “Variant discovery in a QTL region on chromosome 3 associated with fatness in chickens,” Animal Genetics, 2015. View at Publisher · View at Google Scholar
  • Yolanda H. Chen, Rieta Gols, and Betty Benrey, “Crop Domestication and Its Impact on Naturally Selected Trophic Interactions,” Annual Review of Entomology, vol. 60, no. 1, pp. 35–58, 2015. View at Publisher · View at Google Scholar
  • Anne-Kathrin Poeppel, Heiko Vogel, Jochen Wiesner, and Andreas Vilcinskas, “Antimicrobial Peptides Expressed in Medicinal Maggots of the Blow Fly Lucilia sericata Show Combinatorial Activity against Bacteria,” Antimicrobial Agents And Chemotherapy, vol. 59, no. 5, pp. 2508–2514, 2015. View at Publisher · View at Google Scholar
  • John Milton Lima, Manoj Nath, Prasad Dokku, K. V. Raman, K. P. Kulkarni, C. Vishwakarma, S. P. Sahoo, U. B. Mohapatra, S. V. Amitha Mithra, V. Chinnusamy, S. Robin, N. Sarla, M. Seshashayee, K. Singh, A. K. Singh, N. K. Singh, R. P. Sharma, and T. Mohapatra, “Physiological, anatomical and transcriptional alterations in a rice mutant leading to enhanced water stress tolerance,” AoB Plants, vol. 7, pp. plv023, 2015. View at Publisher · View at Google Scholar
  • Virginia Carvalhais, Nuno Cerca, Manuel Vilanova, and Rui Vitorino, “Proteomic profile of dormancy within Staphylococcus epidermidis biofilms using iTRAQ and label-free strategies,” Applied Microbiology and Biotechnology, 2015. View at Publisher · View at Google Scholar
  • Gui-Ming Deng, Qiao-Song Yang, Wei-Di He, Chun-Yu Li, Jing Yang, Cun-Wu Zuo, Jie Gao, Ou Sheng, Shao-Yun Lu, Sheng Zhang, and Gan-Jun Yi, “Proteomic analysis of conidia germination in Fusarium oxysporum f. sp. cubense tropical race 4 reveals new targets in ergosterol biosynthesis pathway for controlling Fusarium wilt of banana,” Applied Microbiology and Biotechnology, 2015. View at Publisher · View at Google Scholar
  • João Pinto da Costa, Virginia Carvalhais, Rita Ferreira, Francisco Amado, Manuel Vilanova, Nuno Cerca, and Rui Vitorino, “Proteome signatures—how are they obtained and what do they teach us?,” Applied Microbiology and Biotechnology, 2015. View at Publisher · View at Google Scholar
  • José C. S. Vieira, Bruna Cavecci, João V. Queiroz, Camila P. Braga, Cilene C. F. Padilha, Aline L. Leite, Wllyane S. Figueiredo, Marília A. R. Buzalaf, Luiz F. Zara, and Pedro M. Padilha, “Determination of the Mercury Fraction Linked to Protein of Muscle and Liver Tissue of Tucunaré (Cichla spp.) from the Amazon Region of Brazil,” Archives of Environmental Contamination and Toxicology, 2015. View at Publisher · View at Google Scholar
  • Richard D. Beger, Sudeepa Bhattacharyya, Xi Yang, Pritmohinder S. Gill, Laura K. Schnackenberg, Jinchun Sun, and Laura P. James, “Translational biomarkers of acetaminophen-induced acute liver injury,” Archives of Toxicology, 2015. View at Publisher · View at Google Scholar
  • S-A. New, L. A. Piater, and I. A. Dubery, “In silico characterization and expression analysis of selected Arabidopsis receptor-like kinase genes responsive to different MAMP inducers,” Biologia Plantarum, vol. 59, no. 1, pp. 18–28, 2015. View at Publisher · View at Google Scholar
  • Amjad Ali, Anam Naz, Siomar C Soares, Marriam Bakhtiar, Sandeep Tiwari, Syed S Hassan, Fazal Hanan, Rommel Ramos, Ulisses Pereira, Debmalya Barh, Henrique César Pereira Figueiredo, David W. Ussery, Anderson Miyoshi, Artur Silva, and Vasco Azevedo, “ Pan-Genome Analysis of Human Gastric Pathogen H. pylori : Comparative Genomics and Pathogenomics Approaches to Identify Regions Associated with Pathogenicity and Prediction of Potential Core Therapeutic Targets ,” BioMed Research International, vol. 2015, pp. 1–17, 2015. View at Publisher · View at Google Scholar
  • Robson da Silva Lopes, Walas Jhony Lopes Moraes, Thiago de Souza Rodrigues, and Daniella Castanheira Bartholomeu, “ProGeRF: Proteome and Genome Repeat Finder Utilizing a Fast Parallel Hash Function,” BioMed Research International, vol. 2015, pp. 1–9, 2015. View at Publisher · View at Google Scholar
  • Wuttichai Mhuantong, Varodom Charoensawan, Pattanop Kanokratana, Sithichoke Tangphatsornruang, and Verawat Champreda, “Comparative analysis of sugarcane bagasse metagenome reveals unique and conserved biomass-degrading enzymes among lignocellulolytic microbial communities,” Biotechnology for Biofuels, vol. 8, no. 1, 2015. View at Publisher · View at Google Scholar
  • Yang Liu, Yang Fang, Mengjun Huang, Yanling Jin, Jiaolong Sun, Xiang Tao, Guohua Zhang, Kaize He, Yun Zhao, and Hai Zhao, “Uniconazole-induced starch accumulation in the bioenergy crop duckweed (Landoltia punctata) II: transcriptome alterations of pathways involved in carbohydrate metabolism and endogenous hormone crosstalk,” Biotechnology for Biofuels, vol. 8, no. 1, 2015. View at Publisher · View at Google Scholar
  • Yang Liu, Yang Fang, Mengjun Huang, Yanling Jin, Jiaolong Sun, Xiang Tao, Guohua Zhang, Kaize He, Yun Zhao, and Hai Zhao, “Uniconazole-induced starch accumulation in the bioenergy crop duckweed (Landoltia punctata) I: transcriptome analysis of the effects of uniconazole on chlorophyll and endogenous hormone biosynthesis,” Biotechnology for Biofuels, vol. 8, no. 1, 2015. View at Publisher · View at Google Scholar
  • Justin T. Page, and Joshua A. Udall, “Methods for mapping and categorization of DNA sequence reads from allopolyploid organisms,” Bmc Genetics, vol. 16, 2015. View at Publisher · View at Google Scholar
  • Jason M. Argyris, Aurora Ruiz-Herrera, Pablo Madriz-Masis, Walter Sanseverino, Jordi Morata, Marta Pujol, Sebastian E. Ramos-Onsins, and Jordi Garcia-Mas, “Use of targeted SNP selection for an improved anchoring of the melon (Cucumis melo L.) scaffold genome assembly,” Bmc Genomics, vol. 16, 2015. View at Publisher · View at Google Scholar
  • Omar Darwish, Rachel Shahan, Zhongchi Liu, Janet P Slovin, and Nadim W Alkharouf, “Re-annotation of the woodland strawberry (Fragaria vesca) genome,” BMC Genomics, vol. 16, no. 1, 2015. View at Publisher · View at Google Scholar
  • Cairui Lu, Changsong Zou, Youping Zhang, Daoqian Yu, Hailiang Cheng, Pengfei Jiang, Wencui Yang, Qiaolian Wang, Xiaoxu Feng, Mtawa Andrew Prosper, Xiaoping Guo, and Guoli Song, “Development of chromosome-specific markers with high polymorphism for allotetraploid cotton based on genome-wide characterization of simple sequence repeats in diploid cottons (Gossypium arboreum L. and Gossypium raimondii Ulbrich),” BMC Genomics, vol. 16, no. 1, 2015. View at Publisher · View at Google Scholar
  • Yufang Guo, Brian Abernathy, Yajuan Zeng, and Peggy Ozias-Akins, “TILLING by sequencing to identify induced mutations in stress resistance genes of peanut (Arachis hypogaea),” BMC Genomics, vol. 16, no. 1, 2015. View at Publisher · View at Google Scholar
  • Roland Schafleitner, Ramakrishnan Madhavan Nair, Abhishek Rathore, Yen-wei Wang, Chen-yu Lin, Shu-hui Chu, Pin-yun Lin, Jian-Cheng Chang, and Andreas W Ebert, “The AVRDC – The World Vegetable Center mungbean (Vigna radiata) core and mini core collections,” BMC Genomics, vol. 16, no. 1, 2015. View at Publisher · View at Google Scholar
  • Shaadi Mehr, Aida Verdes, Rob DeSalle, John Sparks, Vincent Pieribone, and David F Gruber, “Transcriptome sequencing and annotation of the polychaete Hermodice carunculata (Annelida, Amphinomidae),” BMC Genomics, vol. 16, no. 1, 2015. View at Publisher · View at Google Scholar
  • Peipei Sun, Yunxiang Mao, Guiyang Li, Min Cao, Fanna Kong, Li Wang, and Guiqi Bi, “Comparative transcriptome profiling of Pyropia yezoensis (Ueda) M.S. Hwang & H.G. Choi in response to temperature stresses,” BMC Genomics, vol. 16, no. 1, 2015. View at Publisher · View at Google Scholar
  • Bala Ani Akpinar, Federica Magni, Meral Yuce, Stuart J. Lucas, Hana Šimková, Jan Šafář, Sonia Vautrin, Hélène Bergès, Federica Cattonaro, Jaroslav Doležel, and Hikmet Budak, “The physical map of wheat chromosome 5DS revealed gene duplications and small rearrangements,” BMC Genomics, vol. 16, no. 1, 2015. View at Publisher · View at Google Scholar
  • Nang Myint Phyu Sin Htwe, Zhong-Qin Luo, Long-Guo Jin, Brian Nadon, Ke-Jing Wang, and Li-Juan Qiu, “Functional marker development of miR1511-InDel and allelic diversity within the genus Glycine,” Bmc Genomics, vol. 16, 2015. View at Publisher · View at Google Scholar
  • Romina Petersen, Haris Djozgic, Benjamin Rieger, Steffen Rapp, and Erwin Robert Schmidt, “Columnar apple primary roots share some features of the columnar-specific gene expression profile of aerial plant parts as evidenced by RNA-Seq analysis,” BMC Plant Biology, vol. 15, no. 1, 2015. View at Publisher · View at Google Scholar
  • Anne Behrend, Thomas Borchert, and Annette Hohe, ““The usual suspects”- analysis of transcriptome sequences reveals deviating B gene activity in C. vulgaris bud bloomers,” BMC Plant Biology, vol. 15, no. 1, 2015. View at Publisher · View at Google Scholar
  • Jonghoon Lee, Nur Kholilatul Izzah, Murukarthick Jayakodi, Sampath Perumal, Ho Jun Joh, Hyeon Ju Lee, Sang-Choon Lee, Jee Young Park, Ki-Woung Yang, Il-Sup Nou, Joodeok Seo, Jaeheung Yoo, Youngdeok Suh, Kyounggu Ahn, Ji Hyun Lee, Gyung Ja Choi, Yeisoo Yu, Heebal Kim, and Tae-Jin Yang, “Genome-wide SNP identification and QTL mapping for black rot resistance in cabbage,” BMC Plant Biology, vol. 15, no. 1, 2015. View at Publisher · View at Google Scholar
  • Fei Guo, Huiwen Yu, Qiang Xu, and Xiuxin Deng, “Transcriptomic analysis of differentially expressed genes in an orange-pericarp mutant and wild type in pummelo (Citrus grandis),” BMC Plant Biology, vol. 15, no. 1, 2015. View at Publisher · View at Google Scholar
  • Fawei Wang, Huan Chen, Xiaowei Li, Nan Wang, Tianyi Wang, Jing Yang, Lili Guan, Na Yao, Linna Du, Yanfang Wang, Xiuming Liu, Xifeng Chen, Zhenmin Wang, Yuanyuan Dong, and Haiyan Li, “Mining and identification of polyunsaturated fatty acid synthesis genes active during camelina seed development using 454 pyrosequencing,” BMC Plant Biology, vol. 15, no. 1, 2015. View at Publisher · View at Google Scholar
  • L.-L. Lin, H.-C. Huang, and H.-F. Juan, “Circadian systems biology in Metazoa,” Briefings in Bioinformatics, 2015. View at Publisher · View at Google Scholar
  • Manoj Kumar Sekhwal, Ajit Kumar Swami, Vinay Sharma, and Renu Sarin, “IDENTIFICATION OF DROUGHT-INDUCED TRANSCRIPTION FACTORS IN Sorghum bicolor USING GO TERM SEMANTIC SIMILARITY,” Cellular & Molecular Biology Letters, vol. 20, no. 1, pp. 1–23, 2015. View at Publisher · View at Google Scholar
  • Cécile Vriet, Lars Hennig, and Christophe Laloi, “Stress-induced chromatin changes in plants: of memories, metabolites and crop improvement,” Cellular and Molecular Life Sciences, 2015. View at Publisher · View at Google Scholar
  • Udaykumar Kage, Arun Kumar, Dhananjay Dhokane, Shailesh Karre, and Ajjamada C. Kushalappa, “Functional molecular markers for crop improvement,” Critical Reviews in Biotechnology, pp. 1–14, 2015. View at Publisher · View at Google Scholar
  • Deissy Juyo, Felipe Sarmiento, Maria Alvarez, Helena Brochero, Christiane Gebhardt, and Teresa Mosquera, “Genetic Diversity and Population Structure in Diploid Potatoes of Solanum tuberosum Group Phureja,” Crop Science, vol. 55, no. 2, pp. 760–769, 2015. View at Publisher · View at Google Scholar
  • S. Alter, K. C. Bader, M. Spannagl, Y. Wang, E. Bauer, C.-C. Schon, and K. F. X. Mayer, “DroughtDB: an expert-curated compilation of plant drought stress genes and their homologs in nine species,” Database, vol. 2015, no. 0, pp. bav046–bav046, 2015. View at Publisher · View at Google Scholar
  • Liu-Qing Wang, Lin-Tong Yang, Peng Guo, Xin-Xing Zhou, Xin Ye, En-Jun Chen, and Li-Song Chen, “Leaf cDNA-AFLP analysis reveals novel mechanisms for boron-induced alleviation of aluminum-toxicity in Citrus grandis seedlings,” Ecotoxicology and Environmental Safety, vol. 120, pp. 349–359, 2015. View at Publisher · View at Google Scholar
  • Yan Zhang, Mao-Zhen Han, Shu-Liang Zhu, Man Li, Xiang Dong, Xue-Cai Luo, Zhe Kong, Yun-Xia Lu, Shu-Yan Wang, and Wang-Yu Tong, “Studies on the function and catalytic mechanism of O-methyltransferases SviOMT02, SviOMT03 and SviOMT06 from Streptomyces virginiae IBL14,” Enzyme and Microbial Technology, 2015. View at Publisher · View at Google Scholar
  • Farahnaz Sadat Golestan Hashemi, Mohd Y. Rafii, Mohd Razi Ismail, Mahmud Tengku Muda Mohamed, Harun A. Rahim, Mohamad Abd Latif, and Farzad Aslani, “Comparative mapping and discovery of segregation distortion and linkage disequilibrium across the known fragrance chromosomal regions in a rice F-2 po,” Euphytica, vol. 204, no. 3, pp. 557–569, 2015. View at Publisher · View at Google Scholar
  • S. X. Xu, Q. Y. Huang, C. S. Lin, F. C. Lin, L. X. Lin, and Q. Y. Shen, “Rapid generation and analysis of expressed sequence tags to uncovering inflorescence secondary metabolism of Bougainvillea spectabilis ‘Speciosas’ by pyrosequencing,” Euphytica, 2015. View at Publisher · View at Google Scholar
  • Abdelraheem Abdelraheem, Ezzat Mahdy, and Jinfa Zhang, “The first linkage map for a recombinant inbred line population in cotton (Gossypium barbadense) and its use in studies of PEG-induced dehydration tolerance,” Euphytica, 2015. View at Publisher · View at Google Scholar
  • Guizhen Liu, Hongxian Mei, Sen Wang, Xinghe Li, Xiefei Zhu, and Tianzhen Zhang, “Association mapping of seed oil and protein contents in upland cotton,” Euphytica, 2015. View at Publisher · View at Google Scholar
  • Shigeyuki Tanaka, Armin Djamei, Libera Lo Presti, Kerstin Schipper, Sarah Winterberg, Simone Amati, Dirk Becker, Heike Büchner, Jochen Kumlehn, Stefanie Reissmann, and Regine Kahmann, “Experimental approaches to investigate effector translocation into host cells in the Ustilago maydis/maize pathosystem,” European Journal of Cell Biology, 2015. View at Publisher · View at Google Scholar
  • Jeanaflor Crystal T. Concepcion, Makara Ouk, Dule Zhao, and Melissa A. Fitzgerald, “The need for new tools and investment to improve the accuracy of selecting for grain quality in rice,” Field Crops Research, 2015. View at Publisher · View at Google Scholar
  • Denisa Petráčková, Petr Halada, Silvia Bezoušková, Zdena Křesinová, and Kateřina Svobodová, “A two-dimensional protein map of Pleurotus ostreatus microsomes-proteome dynamics,” Folia Microbiologica, 2015. View at Publisher · View at Google Scholar
  • Hossein Azadi, Mansour Ghanian, Omid M. Ghuchani, Parisa Rafiaani, Clauvis N. T. Taning, Roghaye Y. Hajivand, and Thomas Dogot, “Genetically Modified Crops: Towards Agricultural Growth, Agricultural Development, or Agricultural Sustainability?,” Food Reviews International, vol. 31, no. 3, pp. 195–221, 2015. View at Publisher · View at Google Scholar
  • Wegi A. Wuddineh, Mitra Mazarei, Geoffrey B. Turner, Robert W. Sykes, Stephen R. Decker, Mark F. Davis, and C. Neal Stewart, “Identification and Molecular Characterization of the Switchgrass AP2/ERF Transcription Factor Superfamily, and Overexpression of PvERF001 for Improvement of Biomass Characteristics for Biofuel,” Frontiers in Bioengineering and Biotechnology, vol. 3, 2015. View at Publisher · View at Google Scholar
  • Baolei Jia, Jinliang Liu, Le Van Duyet, Ying Sun, Yuan H. Xuan, and Gang-Won Cheong, “Proteome profiling of heat, oxidative, and salt stress responses in Thermococcus kodakarensis KOD1,” Frontiers In Microbiology, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Mitzuko Dautt-Castro, Adrian Ochoa-Leyva, Carmen A. Contreras-Vergara, Magda A. Pacheco-Sanchez, Sergio Casas-Flores, Alejandro Sanchez-Flores, David N. Kuhn, and Maria A. Islas-Osuna, “Mango (Mangifera indica L.) cv. Kent fruit mesocarp de novo transcriptome assembly identifies gene families important for ripening,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Tomáš Takáč, and Jozef Å amaj, “Advantages and limitations of shot-gun proteomic analyses on Arabidopsis plants with altered MAPK signaling,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Capilla Mata-Pérez, Beatriz Sánchez-Calvo, Juan C. Begara-Morales, Francisco Luque, Jaime Jiménez-Ruiz, María N. Padilla, Jesús Fierro-Risco, Raquel Valderrama, Ana Fernández-Ocaña, Francisco J. Corpas, and Juan B. Barroso, “Transcriptomic profiling of linolenic acid-responsive genes in ROS signaling from RNA-seq data in Arabidopsis,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Anna Rita Trentin, Micaela Pivato, Syed M. M. Mehdi, Leonard Ebinezer Barnabas, Sabrina Giaretta, Marta Fabrega-Prats, Dinesh Prasad, Giorgio Arrigoni, and Antonio Masi, “Proteome readjustments in the apoplastic space of Arabidopsis thaliana ggt1 mutant leaves exposed to UV-B radiation,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Anders Overby, Ragni Adelsten Stokland, Signe Elisabeth Asberg, Bjornar Sporsheim, and Atle Magnar Bones, “Allyl isothiocyanate depletes glutathione and upregulates expression of glutathione S-transferases in Arabidopsis thaliana,” Frontiers In Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Slávka BekeÅ¡ová, George Komis, Pavel KÅ™enek, Petra Vyplelová, Miroslav Ovečka, Ivan Luptovčiak, Peter Illés, Anna KuchaÅ™ová, and Jozef Å amaj, “Monitoring protein phosphorylation by acrylamide pendant Phos-Tagâ„¢ in various plants,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Wei Sun, Xiao Hui Xu, Xiu Wu, Yong Wang, Xingbo Lu, Hongwei Sun, and Xianzhi Xie, “Genome-wide identification of microRNAs and their targets in wild type and phyB mutant provides a key link between microRNAs and the phyB-mediated light signaling pathway in rice,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Peng Sun, Xingguo Xiao, Liusheng Duan, Yuhai Guo, Jianjun Qi, Dengqun Liao, Chunli Zhao, Yan Liu, Lili Zhou, and Xianen Li, “Dynamic transcriptional profiling provides insights into tuberous root development in Rehmannia glutinosa,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Guangxuan Tan, Kun Liu, Jingmin Kang, Kedong Xu, Yi Zhang, Lizong Hu, Ju Zhang, and Chengwei Li, “Transcriptome analysis of the compatible interaction of tomato with Verticillium dahliae using RNA-sequencing,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Sona Fekecsová, Maksym Danchenko, Lubica Uvackova, Ludovit Skultety, and Martin Hajduch, “Using 7 cm immobilized pH gradient strips to determine levels of clinically relevant proteins in wheat grain extracts,” Frontiers in Plant Science, vol. 6, 2015. View at Publisher · View at Google Scholar
  • Manosh Kumar Biswas, Peng Chen, Mohamed Hamdy Amar, and Xiuxin Deng, “Novel polymorphic EST-based microsatellite marker isolation and characterization from Poncirus trifoliata (Rutaceae),” Frontiers of Agricultural Science and Engineering, vol. 2, no. 1, pp. 60, 2015. View at Publisher · View at Google Scholar
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  • Nur Fatihah Mohd-Yusoff, Pradeep Ruperao, Nurain Emylia Tomoyoshi, David Edwards, Peter M. Gresshoff, Bandana Biswas, and Jacqueline Batley, “Scanning the Effects of Ethyl Methanesulfonate on the Whole Genome of Lotus japonicus Using Second-Generation Sequencing Analysis,” G3-Genes Genomes Genetics, vol. 5, no. 4, pp. 559–567, 2015. View at Publisher · View at Google Scholar
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  • Jing-Jing Tian, Rong-Hua Lu, Hong Ji, Jian Sun, Chao Li, Pin Liu, Cai-Xia Lei, Li-Qiao Chen, and Zhen-Yu Du, “Comparative analysis of the hepatopancreas transcriptome of grass carp (Ctenopharyngodon idellus) fed with lard oil and fish oil diets,” Gene, 2015. View at Publisher · View at Google Scholar
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