Samples (surveillance study or sporadic cases) Country Age Technique/genotyping tool Species/genotypes/subgenotypes1 Reference Human stools India Children 18S rRNA, SSU, COWP, Cpgp40/15, TRAP-C1-based PCR C. hominis (Ia, Id, Ie, Ib), C. parvum (Ic), C. felis [36 ] Environmental (water) China — 18S rRNA PCR-RFLP and sequence analyses; GP60 C. hominis (IbA19G2, IbA20G2, and IbA21G2), Ia, Id, Ie (IeA12G3T3), If (IfA22G1) C. meleagridis , C. baileyi , C. parvum , C. suis , C. muris , rat genotype, avian genotype 3[41 ] Human stools Perù Children GP60 C. hominis (Ia, Ib, Id, Ie, Id), C. parvum (IIc), C. meleagridis , C. canis , C. felis [50 ] Human stools Ireland Adults and children 18S rRNA and COWP PCR-RFLP; GP60 C. hominis (IbA10G2), C. parvum (IIaA18G3R1)[51 ] Human stools Belgium Adults and children 70-kDa heat shock protein, 60-kDa glycoprotein (GP60) C. hominis (IbA10G2, IbA9G3) C. parvum (IIaA15G2R1, IIcA5G3a, IIdA16G1 IIaA15G2R1)[62 ] Human stools UK Adults and children COWPand small sub-unit (SSU) rRNAgene PCR-RFLP C. parvum, C. hominis , C. meleagridis , C. felis , C. canis , Cryptosporidium cervine, horse, skunk genotypes[63 ] Human stools Haiti Adults and children 18S rRNAPCR-RFLP C. hominis , C. parvum, C. felis [69 ] Human stools Perù Adults GP60 C. hominis (Ia, Ib, Id, Ie) C. canis , C. felis , C. parvum , C. meleagridis [74 ] Human and animal stools Portugal Adults and children GP60 C. hominis (Ib, If), C. parvum (IIa, IIb, IIc and IId)[78 ] Environmental (water) France — IMS-IFA2 , 18S rRNA PCR-RFLP C. hominis , C. parvum [96 ] Animal stools Ireland Neonatal calves GP60 C. parvum (IIaA18G3R1), C. bovis , Cryptosporidium deer-like genotype[101 ] Environmental (water) Portugal — IMS-IFA1 , PCR C. hominis (IdA15) C. parvum (IIaA15G2R1, IIaA16G2R1, IIdA17G1)[103 ] Animal and human stools Portugal Adults and children GP60 C. hominis , C. parvum , C. felis , C. meleagridis [104 ] Human stools MI (USA) Adults and children 18S rRNA and COWPPCR-RFLP; GP60 C. hominis , C. parvum (cervine genotype, cervine genotype variant, human genotype W17)[148 ] Animal and human stools Iran Children and one adult 18S rRNA PCR-RFLP C. parvum , C. hominis (anthroponotic and zoonotic genotype)[164 ] Animal stools China Neonatal calves 70-kDa heat shock protein; 18S rRNA, actin-based PCR C. andersoni , C. ryanae [165 ] Animal stools India Neonatal calves 18S rRNA PCR-RFLP C. parvum , C. hominis [206 ] Human stools UK Adults and children SSCP-based analysis of the 18S rRNA SSU and ITS-2 spacer C. parvum (types 1 and 2)[208 ] Human stools UK Adults GP60 C. hominis (IbA10G2)[209 ] Human stools Kenya, Malawi, Brazil, Vietnam, UK Adults and children 18S rRNA PCR-RFLP C. parvum (human genotype), C. parvum (bovine genotype), C. meleagridis , C. muris [222 ] Human stools Switzerland, Kenya, USA Adults and children 18S rRNA; HSP-70; acetyl coenzyme A synthetase C. parvum (“human” genotype, “cattle” genotype), C. felis, C. meleagridis [223 ] Human stools Spain Adults and children 18S rRNA-, COWP-based PCR-RFLP C. hominis , C. parvum , C. meleagridis , C. felis [224 ] Human stools Equatorial Guinea Adults and children COWP-based PCR-RFLP C. parvum , C. hominis , C. meleagridis [232 ] Human and animal stools Thailand Adults 18S rRNA PCR C. parvum [239 ] Human stools Perù Adults and children 18S rRNA-based PCR-RFLP C. hominis , C. meleagridis , C. parvum , C. canis , C. felis, Cryptosporidium (pig genotype)[240 ] Human stools Poland Adults and children COWP and
-tubulin-based PCR C. hominis , C. parvum , C. meleagridis ,[254 ] Human stools Madagascar Children GP60 C. hominis (Ia, Id, Ie), C. parvum (IIc)[275 ]
