- About this Journal ·
- Abstracting and Indexing ·
- Advance Access ·
- Aims and Scope ·
- Article Processing Charges ·
- Articles in Press ·
- Author Guidelines ·
- Bibliographic Information ·
- Citations to this Journal ·
- Contact Information ·
- Editorial Board ·
- Editorial Workflow ·
- Free eTOC Alerts ·
- Publication Ethics ·
- Reviewers Acknowledgment ·
- Submit a Manuscript ·
- Subscription Information ·
- Table of Contents
ISRN Molecular Biology
Volume 2012 (2012), Article ID 596289, 14 pages
Models, Regulations, and Functions of Microtubule Severing by Katanin
Department of Biological Sciences, Indian Institute of Science Education and Research, Kolkata, Mohanpur, Nadia 741252, India
Received 1 August 2012; Accepted 20 August 2012
Academic Editors: H. Hashimoto, A. J. Molenaar, and A. Montecucco
Copyright © 2012 Debasish Kumar Ghosh et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Regulation of microtubule dynamics depends on stochastic balance between polymerization and severing process which lead to differential spatiotemporal abundance and distribution of microtubules during cell development, differentiation, and morphogenesis. Microtubule severing by a conserved AAA family protein Katanin has emerged as an important microtubule architecture modulating process in cellular functions like division, migration, shaping and so on. Regulated by several factors, Katanin manifests connective crosstalks in network motifs in regulation of anisotropic severing pattern of microtubule protofilaments in cell type and stage dependent way. Mechanisms of structural disintegration of microtubules by Katanin involve heterogeneous mechanochemical processes and sensitivity of microtubules to Katanin plays significant roles in mitosis/meiosis, neurogenesis, cilia/flagella formation, cell wall development and so on. Deregulated and uncoordinated expression of Katanin has been shown to have implications in pathophysiological conditions. In this paper, we highlight mechanistic models and regulations of microtubule severing by Katanin in context of structure and various functions of Katanin in different organisms.
Microtubule number and distribution in cellular cytoskeleton arrangement is important in organismal development, stage specification, shape determination and division. Microtubules, being heteropolymer of two tubulin proteins, α-tubulin, and β-tubulin, show varying degree of polymerization to maintain proper transport of intracellular cargo, divisional chromosome arrangement/segregation, and various other cellular functions. Regulation of microtubule length and spatial structural organization not only depend on nucleation and treadmilling caused tubulin polymerization, but also on regulated degree of microtubule severing. Microtubule severing requires internal cleavage in microtubule lattice followed by continuous depolymerization of tubulin dimers from ends. Microtubules are severed by enzymes like Katanin, Spastin, and Fidgetin (Table 1). Works in last two decades reveal potential role of Katanin in dynamic alteration of microtubule structure and orientation in maintenance of cellular homeostasis. Katanin is ubiquitously expressed in plants and lower to higher animals and it systemic or cell specific activity modulates differential formation and organization of microtubule arrays in cell. Physiological functioning of Katanin and the resulting microtubule fragmentation is now reported to be important underlying mechanism in cell division, neuron development, cell migration, and locomotory organelle formation. Systems network motifs involving Katanin are specified by various regulatory proteins, degradosome machineries, and coordinated functioning of other microtubule severing proteins, and these networks precisely act as effectors and stabilizing remodelers of cytoskeleton structure. Regulation of Katanin localization, interaction with other proteins influence optimality of microtubule severing and it important to understand models, regulations, and biological functions of microtubule severing by enzymes like Katanin to specify their roles in physiological and pathological conditions.
Katanin is a heterodimeric hydrolase belonging to AAA family protein (MSP1/Katanin/Spastin group) (Table 2) . The two constituent subunits of Katanin are named according to their molecular weight. The smaller and catalytic subunit is 60 KDa and it is named as p60, while the larger and regulatory subunit is 80 KDa and named as p80 . Human Katanin p60 subunit (KATNA1) is a 491 aminoacid long protein, which contains the AAA region functioning in ATP associated microtubule severing activity (Figure 1(a)). The AAA region contains a conserved P-loop NTPase fold which is formed by conserved aromatic aminoacids . The P-loop harvests energy released from ATP hydrolysis to unfold and remodel complex tertiary structures of tubulin proteins in microtubules. The two distinct “Walker-A” and “Walker-B” motifs in p60 subunit help in ATP binding. The N-terminal residues in the Walker motifs of AAA domain participate in imparting positional stability of ATP within the protein and the residues in the C-terminal end of AAA domain help in catalyzing hydrolysis of ATP to ADP with concomitant energy release. C-terminal Vps-4 region in p60 allows this subunit to undergo polymerization . 14–16 nm ring shaped unstable oligomers of p60 are reported . Though the exact stoichiometry and mechanism of oligomerization is not well understood, it is observed that ADP bound p60 moieties are usually monomeric and exchange of ADP by ATP induces oligomerization of p60 monomers to hexameric state. The ATP bound hexameric p60 shows high microtubule severing activity and this activity is substantially increased in low tubulin to p60 ratio. Stability of p60 oligomers in vivo condition is reported to be sufficiently low. Labile p60 oligomers undergo spontaneous dissociation into monomers even in presence of ATP . Though exact spatiotemporal regulation and kinetics of association-dissociation of p60 is not fully studied, it is documented that hexamerization happens in concerted and template dependent manner on microtubule lattice. Multiple interactions of p60 with tubulin dimers enhance multimerization process. The N-terminal region of p60 is responsible for interprotein interactions. This region can stably bind to microtubules, p80 under different concentration and signal-dependent circumstances. The crystal structure of this N-terminal region of p60 is resolved recently  and it depicts a three-strand helix bundle structure which is similar to microtubule interacting and trafficking domain (MIT domain) and is regarded as tubulin binding domain (TBD) (Figure 1(c)) . The helix-2 and helix-3 of this structural motif have high number of positively charged aminoacids aligned at the surface. High positive charge densities in the helix surfaces allow this N-terminal region to bind negatively charged aminoacids of tubulins by electrostatic interactions. Helix-2 also contains a Ca+2 binding site which dramatically reduces the rate of ATP hydrolysis in p60 without interfering p60 subunit’s ability to bind microtubules . Binding of microtubules and C-terminal domain of p80 to NTD of p60 enhances severing activity of p60 and Ca+2 binding to p60 NTD brings back the Katanin activity to ground level. Stability and functional expression of p60 subunit are highly regulated by posttranslational modifications, like phosphorylation of serine and threonine aminoacids by protein kinase (like DYRK-2).
Human Katanin p80 (KATNB-1) is 655 aminoacid long protein (Figure 1(b)) which plays important role in regulation of Katanin localization, targeting and functioning of Katanin protein . N-terminus of this subunit contains a WD40 domain which functions as negative regulator of microtubule disassembly at spindle poles . This region also controls interaction of p80 with centrosome and other microtubule associated proteins like dynein. The C-terminal region of this protein contains Con-80 domain which mediates binding of p80 with proteins like PAFAH1B1, NDEL1 and p60. In p80, a single phosphorylation at Ser-395 has been elucidated, but its role in cellular physiology is not well emphasized yet.
3. Models of Microtubule Severing by Katanin
Several experimental and theoretical studies came up with various models to reveal physical and molecular mechanisms of microtubule severing by enzymes like Katanin, Spastin, and so forth. A study emphasizes the role of molecular motors in development of internal exciting forces within microtubules which results in bending of microtubules into “S” and “V” shapes and these shape fluctuations cause release of tubulin dimers from deformed sites . Tubulin vacant regions serve as perfect sites for Katanin deposition and initiation of severing phenomenon. Deformed spatial conformation and elastic properties of microtubules result from lattice strains generated by activity of microtubule-associated motor proteins . Katanin not only binds to destabilized microtubule structures, but it also uses chemical energy of ATP hydrolysis and generates mechanical force to increase the lattice strain even more  (Figure 2(a)). This phenomenon represents continuous displacement of tubulin dimers from microtubules and Katanin shows fairly high processivity in removing tubulins from tubulin polymers. A second model of Katanin-mediated microtubule severing includes dynamic instability mechanism and a phenomenon which can be named as “size dependent mobilization”. Dynamic instability model explains spontaneous nucleation and/or depolymerization of microtubules in regulation of its length, shape, and form . Size dependent mobilization model describes greater intracellular flux of shorter microtubules like ones which are generated from Katanin-mediated severing . Apart from causing continuous depolymerization from ends, Katanin can also induce fragmentation of microtubules from defective internal regions  and the concept of easy transport of such fragments remains in their ability to move easily and concertedly with less exerted forces by motor proteins, like dynein . Severed by Katanin, shorter microtubules are rapidly transported to various parts of the cells and maintain structural organization at those regions. Physiological need of shorter microtubules and equilibrium of local longer to shorter microtubules might also favor microtubule severing by Katanin.
A study in Caenorhabditis elegans showed that Katanin binding activity is preferentially initiated at β-tubulins. Among the two isotypes of β-tubulins, Katanin shows enhanced preference for TBB-2 compared to TBB-1 . Differential redundancy of these two isoforms in microtubules may regulate severing activity of Katanin (Figure 2(b)). Another study in Drosophila melanogaster shows a Myosin-XV homolog, Sisyphus, binds Katanin p60 subunit by its FERM domain and transports it to cellular regions, like filopodia formation sites, where microtubule reorganization requirement is critical .
Microtubule severing is also higher in mesh like microtubule structure compared to array like structures. Severing at microtubule cross-over provides a mechanism to remove aberrantly aligned and improperly branched microtubules (Figure 2(c)) . As the angle of branching is important, a certain limit and range of angulations determine specificity and optimum activity of Katanin at branching points. Covalent Post translational modifications of tubulins, like poly-glycation, polyglutamylation, may also play important and determining functions in severing . Older microtubules, having higher amount of such chemical modifications, are hotspots for Katanin binding and severing activity (Figure 2(d)) . Acetylation of microtubules is also linked to increased severing activity by Katanin . Deacetylation of microtubules by promiscuous activity of HDAC6 has been shown to effectively reduce microtubule depolymerization by Katanin .
Many theoretical studies have also enlightened mechanistic sides of Katanin-mediated microtubule severing. Based on the fundamental microtubule instability theory, a theoretical study shows possibility of random microtubule severing by Katanin. The overall microtubule numbers are, however, independent of severing rate and mean length of microtubules decrease in response to severing. The rate of severing is predicted to be proportional to microtubule length. Longer microtubules are severed to shorter microtubules of varying length and distribution . Both of these results inculcate with observed cellular phenomenon of microtubule number conservation and compacted organization by short microtubule arrays. Another theoretical study using “Monte Carlo Simulation” shows that lattice defects and tensile constraints along microtubule length serve as Katanin activity sites . Microtubule bending increases elastic energy in tubulin dimers to a large extent (~40 fold) and results in higher breaking and severing rates at these sites . A Drosophila study experimentally establishes that lattice defects and proto-filament shift defects are primary sites for Katanin p60 binding . Katanin, at those regions, stimulate microtubule severing in p60 concentration and ATP dependent manner.
In a study conducted with both human and mouse Katanin, it’s showed that helix-2 and helix-3 of the N-terminal domain (NTD) in p60 of Katanin bind to solvent accessible helix-11 (residues 386–396) and helix-12 (residues 420–430) of tubulin. p60-microtubule interactions have similarities with Vps4-ESCRT III interaction. p60 pulls down α-β tubulin dimers by providing the NTD as adaptor for microtubules. This proposed model emphasizes on formation of p60 NTD and tubulin tetramer. Specifically, in helix-3 of p60 NTD, Arg49, Gln53, Lys64, and Lys67 aminoacid residues play important part in interacting with tubulins [3, 5].
Kinetically, Katanin-mediated severing shows two distinct temporal phases; an initial stage of Katanin independent severing stage which increases microtubule concentration followed by Katanin dependent microtubule dissociation phase that does not increase microtubule density .
4. Regulation of Katanin Stability and Activity
Katanin stability and activity is spatiotemporally regulated by complex levels of chemical modifications, differential degradation mechanisms (Figure 3), and several Katanin interacting/regulatory proteins (Figure 4). In C. elegans, the major pathway of Katanin protein regulation during embryogenesis associated mitosis involves Cullin dependent degradation of Katanin. There are mainly two pathways of MEI-I (p60) degradation. During mitosis, an adaptor protein, MEL26 recruits MEI-I to CUL3-based E3 Ubiquitin Ligase and signals MEI-I to undergo polyubiquitination and subsequent proteasomal degradation . BTB domain of MEL26 binds to one conserved domain of CUL3 and ROC1 helps in recruitment of MEI-I to CUL3/MEL26 complex . However, during meiosis, CUL2-based Ubiquitin Ligase helps in polyubiquitination of MEL26 for it is proteasomal degradation . This keeps the MEL26 level low and regulates the Katanin activity during meiotic divisions. Obscurin (UNC-89) protein can also physically interact with MEL26 protein in CUL3-MEL26 complex to diminish MEL26 protein’s inhibitory activity against MEI-I . In a second mechanism, Ctb9/KLHDC5 complex is reported to bind CUL3 and the final complex, CUL3/Ctb9/KLHDC,5 binds Katanin to mark it for proteasomal degradation . Another CUL3 complex, SKP1/CUL3/F-Box (SCF complex), has been shown to bind Nedd8 protein and this neddylation increases affinity of E2 Ligase for E3 complex, helping the E3 complex to polyubiquitinates MEI-I for 26S proteasomal degradation . An upstream regulator of this pathway, COP9, helps in deneddylation of CUL3 to passively regulate stability of MEI-I during mitosis .
Chemical modifications, like phosphorylation, have significant role in Katanin stability and activity. Protein Kinase DYRK2 can phosphorylate several serine and threonine residues of both subunits of Katanin to enhance their degradation. DYRK2 also acts as a scaffolding protein for EDVP complex (an E3 Ubiquitin Ligase containing EDD, DDB1, VPRBP) and this function of DYRK2 might have roles in facilitating Ubiquitin tagging to phosphorylated Katanin (EDD helps in ubiquitination of phospho-katanin) . Just after mitosis exit, MBK2/DYRK2 Kinase complex promotes phosphorylation dependent degradation of Katanin [32, 33] with the help of anaphase promoting complex (APC) . Loss of function mutation of mbk2 shows incoherent distribution of p-granules, impaired mitosis, and disorganized microtubule arrays .
Cdk proteins, like Cdk1 and Cdk5, can phosphorylate NDEL1 and facilitate NDEL1 association with p60 subunit of Katanin [35, 36]. NDEL1 interaction with Katanin causes more deposition of Katanin to centrosome during cell division . Katanin localization to centrosome is also favored by other proteins like TACC (TACC3) . NDEL1 dephosphorylation is catalyzed by a serine/threonine phosphatase, Protein Phosphatase 4 (PP4), and the cycle of phosphorylation-dephosphorylation of NDEL1 is presumed to regulate Katanin activity during various stages of cell cycle . PP4 can also dephosphorylate Katanin and activate it in accordance to upstream signals . Phosphorylation of NDEL1 (at Ser251) by Aurora-A also helps polyubiquitin mediated proteasomal degradation of NDEL1 and facilitate release of Katanin p60 from centrosomes . Specific aminoacid residues in Katanin subunits of different species and their differential modifications may play determining role in Katanin activity. P60 of Xenopus laevis differs from Xenopus tropicalis in a key Ser131 residue which can be phosphorylated by Aurora-B. Phosphorylation of this p60-Ser131 dramatically reduces severing activity of Katanin in X. laevis meiotic egg extracts .
In Xenopus egg extracts, a MAP4 homologous protein XMAP230 shows inhibitory activity against Katanin . However, Cyclin-B/Cdk1 complex can reverse this inhibitory effect. Another protein resembling Polo-like kinase, Plx1, acts as coactivator of Katanin to increase its activity in terms of microtubule severing .
A single report suggests that C. elegans Katanin p60 homolog, MEI-1, can be regulated at translation level. SPN-2 protein binds to OMA1 and directs OMA1 to bind 3′-UTR of mei-1 mRNA. OMA1 subsequently inhibits translational expression of mei-1 mRNA during embryonic mitosis .
5. Role of Katanin in Cell Division
Role of Katanin in cell division is well established (Figure 5). Though initial studies indicates most of the roles of Katanin are restricted in meiotic divisions, recent studies indicate that Katanin has functional activity even in mitotic divisions . Katanin, along with its functional orthologs like Spastin, Lipotransin, Fidgetin, takes active part in microtubule processing during divisional stages. Early reports in Xenopus show Katanin to be a primary protein involved in microtubule dependent regulation of spindle formation . Spindle microtubules are depolymerized by Katanin and this keeps the balance in maintaining optimum K-fiber microtubule bundle number during division . In C. elegans, Katanin activity in spindle formation is reported to be only required in meiotic divisions and not in mitotic divisions . Assembly and formation of meiotic spindles from centriole poles are shown to be mediated by asymmetric deposition of Katanin at these poles. However, Katanin’s severing activity is not shown to be required for such spindle formation . During meiosis I, bipolar spindle move towards the cortex after formation. Katanin helps in spindle translocation towards cortex, and in Katanin depleted oocytes, FZY1/CDC20 complex, and cytoplasmic streaming compensates activity of Katanin to allow movement of unstable spindle towards cortex .
In Drosophila melanogaster, Pacman Flux during anaphase chromosome segregation from metaphase plate towards spindle pole is governed by activity of Katanin . Katanin severs microtubules near plus ends and helps depolymerization of microtubules near the microtubule-chromosome attachment site for continued movement of chromosomes towards spindle pole in late anaphase stage. Other microtubule severing enzymes like Spastin and Fidgetin remove tubulins from microtubule minus ends in pole to cause active depolymerization of microtubules at this end to fasten chromosome movement towards spindle pole. Redistribution of γ-tubulin ring complex from centrosome to mitotic spindles and subsequent addition of these γ-tubulin to ends of microtubules is thought to be largely influenced by Katanin caused centrosomal microtubule degradation . To compensate the inefficient nucleation process in microtubule polymerization, large numbers of short microtubules are generated by Katanin activity near chromosomes to increase the chance and efficiency of nucleation and proper orientation of cytoskeleton . A recently discovered Katanin like protein 1 (KL1) is also shown to be localized in spindle poles and alters kinetics of γ-tubulin association to plus ends of microtubules to modulate it is stability .
Katanin-mediated regulation of spindle assembly has now been shown to be an important mechanism in human male gametogenesis. Specifically, Katanin p80 defines the spindle structure in male meiotic divisions and also exerts it is effects at later stages when it takes active part in clearing midbody microtubules for proper progression of cytokinesis. Proper microtubule positioning by Katanin in sperms results in structural shaping of head, axoneme, tail and influences sperm motility . Katanin related protein, KATNAL-1, has also been reported to be involved in spermatogenesis. It maintains exact parallel microtubule array structure in the testicular sertoli cells and this allows flux of nutrients from sertoli cells to germ cells for spermatid development and movement through seminiferous epithelium . Inhibited expression of Katanin p80 and KATNAL-1 are associated with abnormal sperm production, sperm motility, and male infertility.
6. Role of Katanin in Neuron Development
In various groups of studies, Katanin has been shown to be key factor in neuronal development in terms of formation and maintenance of protrusions like axons (Figure 6) . Katanin helps in axonal outgrowth by regulating and optimizing microtubule polymerization dynamics . The “Growth Cone Mobility Model,” which represents concerted growth of neuronal microtubules, also emphasizes the role of Katanin-mediated microtubule severing for proper arrangements of microtubules along the axon . Primary development of hippocampal neurons and neurite extensions are facilitated by Leukocyte cell derived chemotaxin 2 (LECT2) factor. It is reported that LECT2 functions in repression of Katanin p60 to regulate microtubular morphallaxis . During formation of interstitial axonal branches, Katanin severed shorter microtubules with serve as sites for new branching and microtubule growth. Basic fibroblast growth factor (bFGF) is reported to upregulate expression of Katanin . It also phosphorylates Tau protein to release them from axonal microtubules. Upregulated Katanin and Tau depleted microtubules enhance microtubule severing and increase the rate and frequency of axonal microtubule branching . In axonal development, activity of Katanin is highly coordinated with localization and activity of another microtubule severing enzyme, Spastin . Spastin is usually located at axonal branch sites where it modulates longer microtubule rearrangement whereas Katanin severs microtubules in protruded axons to make branched and intermingled microtubule rearrangement. IGF1 has been shown to induce different responses for Katanin and Spastin . While Katanin is insensitive to IGF1, Spastin caused microtubule process lengths and process numbers is reduced in response to IGF1 response. Though the entire mechanism of preferential localization of Spastin and Katanin is not known, it is believed that cooperative and synergistic functioning in between them is essential for proper microtubule organization pattern in axons. Centrosome in neurons serves as site for microtubule nucleation and concentrated localization of Katanin at centrosome helps in release of microtubules from centrosome . Katanin remains dispersed in normal neuronal cell body where it severs microtubules which are released from centrosome. This severing of released microtubules is to process them into even shorter microtubules that can be transported to axons to allow axonal outgrowth. Distribution and concentration of two subunits of Katanin also varies during different developmental stages of neuron . Intense p60 expression is seen in specific differentiation stages. It is more abundant in axonal length and tips to enhance the total number of microtubule processes. On the contrary, fluctuation of p80 expression is less during neuron development and a large fraction of p80 is localized in cell body to play limiting role in altering microtubule mass. The mechanism of regulation of this asymmetric distribution of p60 and p80 in neurons is not known, but this certainly causes more differentiation in severing pattern of microtubules along axons compared to cell body. This differentiation is extreme when axons reach their targets. Not only Katanin, but sensitivity of microtubules is presumed to be influenced by other less known microtubule severing influencing factors.
Though Katanin activity is restricted in dendrites, dendrite pruning in Drosophila melanogaster sensory neurons involves noticeable degree of Katanin p60 like-1-(Kat-60L1-) mediated microtubule severing . Katanin levels are also high in proximal dendrite regions of these sensory neurons and show higher degree of severing in these regions . Specificity of Katanin to axonal microtubules compared to dendrite microtubules depends on both acetylation status and Tau protein association to microtubules . Stretches of microtubules in axons are more acetylated and these regions show higher sensitivity to Katanin (but not for Spastin) than relatively less acetylated dendrite microtubules. Katanin p60 like protein-1 (Kat-p60L1) regulates Drosophila larval class IV dendritic neuron’s dendrite morphology. This protein acts in microtubule growth for formation of filopodia like structures to help in stabilizing terminal dendritic structure during dendritic arbor development .
7. Role of Katanin in Disease Modulation
Role of Katanin in disease induction, progression, differentiation, and stage determination is not studied intensively. Few studies are revealing altered Katanin functioning in modulation of diseases. Expression and functional pattern of Katanin p60 subunit in prostate cancer show variability when compared to normal prostate . Higher expression of p60 in prostate cancer causes inhibition of cell proliferation but allows cancerous cells to take more aggressive migration property. In normal prostates, expression of p60 is only limited in basal cells while in prostate adenocarcinoma cells, p60 expression is much higher throughout prostate. Role of Katanin in metastasis is presumed to be mediated by enhanced microtubule severing activity which enforces reorganization of cytoskeleton structure to help forming cellular protrusions involved in cell motility [64, 65]. Higher p60 expression is also observed in bone metastatic cells. Study in Drosophila melanogaster shows that Katanin (Dm-Kat60) regulates depolymerization of tubulins from plus ends of microtubules in cortex of interphase cells and this phenomenon highly regulates cellular attachments and migration . A tumor suppressor protein, LAPSER1/LZTS2 (LAPSER1) can bind to regulatory p80 subunit of Katanin at centrosome to regulate cytokinesis of cell division by modulating central spindle formation . Regulation of p80 by LAPSER1 also limits migration of metastatic prostate cancer cells by enhancing γ-tubulin dissipation from microtubule end . Loss of γ-tubulin from microtubule ends destabilizes microtubules, finally leading to catastrophe in microtubule organization in mobility associated protrusions. Loss of heterozygosity of LAPSER1 gene correlates with increased Katanin activity and favors metastasis. Again, overexpression of LAPSER1 causes aberrant mitosis followed by failure in cytokinesis due to deregulated activity of Katanin p80 subunit.
In Tauopathies like Alzheimer’s disease, elevated Katanin expression causes extensive degradation of Tau protein depleted microtubules in neurons [12, 58]. Activity of Katanin in neurons is dependent upon whether microtubule is associated with Tau protein. Tau- and microtubule-associated protein 2 (MAP-2) have similar microtubule binding domains and they bind to microtubules to protect them from severing by Katanin . Tau released from microtubules is caused by it is phosphorylation and this causes uncoordinated fragmentation of microtubules . Acetylation of tubulins also stimulates Katanin-mediated microtubule severing . HDAC catalyzed deacetylation of tubulins and/or binding of peptides (like NAP) to microtubules efficiently prevent Katanin activity . NAP (Davunetide) is an ADNP protein-derived eight-aminoacid long small neuropeptide which binds to Tau lost faces of microtubules and shields these faces from Katanin binding . Increased NAP functions show positive responses in schizophrenic patients and mitigate with decreased microtubule severing by Katanin . This phenomenon leads to reduced level of neuroapoptosis. Interplay of Tau binding and covalent chemical modifications in microtubules are supposed to be key regulatory factors in optimizing Katanin activity during neuronal outgrowth in neuropathies .
Mutations in AAA proteins like Spastin and Katanin are seen to be associated with Hereditary Spastic Paraplegia (HSP) . This disease manifests abnormal cellular microtubule number, distribution, arrangement, and this may be attributed to reduced or aberrant functioning of mutated Katanin protein. Like many other MAPs, Katanin contains a sequence motif, LisH, which has implications in diseases like Miller-Dieker lissencephaly syndrome, Treacher Collins syndrome, Oral-facial-digital type I syndrome, Ocular albinism, and the role of Katanin in these diseases is still obscure and seeks further investigations .
8. Katanin Functions in Plant and Lower Organisms
8.1. Role in Plants
A considerable number of studies have been conducted in Arabidopsis thaliana to understand various cellular and physiological roles of Katanin in plant systems. Like in animals, one major role of Katanin in plants is to regulate cell division by regulating spindle microtubule severing . Katanin mutated Arabidopsis thaliana cell lines, like fra2 mutant and leu1 mutant, show abnormal microtubule orientation, alignment, and polarity in divisional phases. These defects in organization of microtubule arrays finally lead to altered division plane orientation.
Katanin plays important role in cortical microtubule organization in both dividing and differentiated cells to maintain plant shape. Forceful reorientation of plant shape like transformation of longitudinal growth to lateral growth by chemicals (e.g., 1-amino cyclopropane-1-carboxylic acid [ACC]) correlates with upregulated Katanin function and subsequent changes in microtubule bundle direction . Arabidopsis thaliana lines, which show constitutive higher expression of Katanin, also show similar results in shortening and thickening of cortical microtubules . Redistribution of Katanin severed shorter microtubules in cortical regions depends upon generation of motile microtubules which possess enhanced ability of being assembled into bundles. New microtubule formation is also maintained by branching from existing microtubules followed by elongation with tubulin polymerization. The γ-tubulin complex’s constituent proteins, GCP2 and GCP3 are deposited on the surface of previously formed microtubules and make platform for nucleation of new microtubules . Though this lateral nucleation and microtubule formation are speculated to be highly regulated by Katanin, the mechanism and associative interplay of Katanin and other proteins are not completely delineated. In tobacco plants, MAP65-1c protein is shown to bind microtubules and protect them from Katanin .
A very recent study indicates that growth in plant tissue is not homogeneous. The heterogeneity in growth is a response to differential mechanical forces imparted on growing neighboring cells and Katanin-mediated severing of microtubules plays important role in such heterogeneity and morphogenesis . Arabidopsis thaliana Katanin mutant, atktn1, shows loss of microtubule arrangement and associated growth pattern diversity due to its lost ability in perceiving mechanical forces that balance homeostasis in cell growth.
Leaf senescence involves increased and early degradation of microtubule network in epidermis cells of mesophyll tissue. Dark plant leaves repress Katanin and it’s homologue and these leaves also undergo less senescence. It’s presumed that Katanin helps in degradation of microtubules in leaf cells to fasten leaf senescence process in response to light and other environmental cues .
Microtubule severing by Katanin is responsive to plant hormones like ethylene, gibberellin . Hormonal induction of Katanin finally determines microfibril content in cell wall. Katanin mutant in Arabidopsis thaliana (leu1) produces truncated Katanin with diminished activity and this mutant shows severe defects in cell wall formation . fra2 mutant also shows aberrant orientation and deposition of cellulose and hemicellulose microfibrils and increase of lignin content . Beside of being disorganized and differentially directed towards various directions, these microfibril bands show reduced primary and secondary cell wall elongation. Katanin allows constructive and proper organization of microfibrils to maintain cell wall’s cellulosic sheath formation.
In rice plants, Katanin p60 homologous protein, DGL1, is reported to be involved in cell elongation and duplication. This protein is also seen to be causing upregulation of gibberellin biosynthesis genes without interfering in this hormone’s signaling cascade . Katanin has been recently shown to be involved in production of fibrous tissues in plants. In common cotton plant (Gossypium spp.), Katanin helps in formation of longer cotton fibers and maintains proper seed oil to endosperm oil ration .
Specification of root epidermis cells from meristematic cells occurs by regulated differentiation driven by Katanin-mediated microtubule severing. Severed microtubules dictate positional cues during root epidermal cell development .
8.2. Role in Lower Organisms
Other than functions in cell division, Katanin is shown to be involved in structural formation, maintenance, and functioning of locomotory organelles like flagella and cilia in lower organisms. In Trypanosomatid parasites (Leishmania major, Trypanosoma brucei, etc.), Katanin p60 reduces length of flagella and p80 regulates cytoskeleton structure . In Chlamydomonas, Katanin helps in cell cycle responsive flagellar resorption by active severing of flagella at transition zones to cause release of doublet microtubules (ciliary disassembly) from basal bodies . Accumulation and microtubule severing by Katanin at flagellar basal bodies is Ca+2 signal dependent . Maintenance of doublet central apparatus of flagella is also dependent on proper expression of Katanin p80 homolog PF15 . In Tetrahymena, activity of Katanin reduces mass and stability of microtubules in cilia . Tubulins generated by Katanin activity eventually aid in increasing ciliary tubulin concentration for spatial regulation of microtubule formation. Proper division of Trypanosoma brucei in its parasitic stage in human blood requires activity of Katanin. Early stage cytokinesis of the organism is helped by KAT60 while the later furrow formation stage is supported by KAT80 .
9. Concluding Remarks
Severing of microtubules introduces itself as an important cytoskeleton reinforcing process that operates at multitier levels during developmental and differentiation stages. Since it is discovery as microtubule severing enzyme, the role of Katanin has been appreciated in coordinating cellular homeostasis. Regulation of microtubule dynamics by it is differential structural stabilization and destabilization by Katanin reveals an important aspect of addressing systemic and/or cell/stage-specific intricate microtubule modulations which finally lead to specification of various cellular processes. Our review summarizes various models of microtubule severing by Katanin, regulations of Katanin in systems network, and representation of major cellular functions of Katanin. Though flourishing researches have been conducted to understand molecular mechanisms of Katanin-mediated microtubule severing and it is consequences in cell, tissue and organismal level; review of researches and literatures on Katanin led us to speculate multiple questions which can inspire progressive research. We summarize few of such questions. (1)Is Katanin expression regulated at transcription level? As Katanin expression varies in cell and developmental stage-dependent way, it is inspiring to understand transcriptional regulation of Katanin. (2)What is the entire biochemical and molecular mechanism of microtubule severing by Katanin? Though structure of N-terminal region of p60 subunit of Katanin is solved, crystal structure of full p60 can give mechanistic insights of severing in terms of catalytic cleft, residues and processes.(3)What is the role of Katanin in neurons, stem cells, and cancer cells in terms of proliferation and developmental potential? (4)What is the role of Katanin-induced microtubule shortening in alteration of invasive property of cancer cell? Cytoskeleton alteration is a major aspect of malignant cancerous cells and studies on role of Katanin in invasion can open new dimensions of controlling metastasis.
As new discoveries are revealing new information on Katanin-based microtubule structure and organization alteration, we are in the brink of starting a voyage of understanding chemical, biophysical, and biological functions of microtubule severing by enzymes like Katanin, Spastin, and so forth.
|KATNA1:||Katanin p60 (ATPase containing) subunit A1|
|KATNB1:||Katanin p80 WD40 containing subunit B1|
|PAFAH1B1:||Platelet-Activating factor acetyl hydrolase 1B1|
|NDEL1:||Nuclear distribution protein nudE Like 1|
|ESCRT III:||Endosomal sorting complex required for transport III|
|Vps4:||Vacuolar protein sorting associated protein-4|
|MEI-I:||Meiotic spindle formation protein-I|
|KLHDC5:||Kelch domain containing protein-5|
|SKP1:||S-phase associated kinase protein-1|
|Nedd8:||Neural precursor cell expressed developmentally down-regulated protein-8|
|DYRK-2:||Dual specific tyrosine-phosphorylation regulated kinase-2|
|DDB1:||DNA damage binding protein-1|
|VPRBP:||Vpr (HIV1) binding protein-1|
|TACC3:||Transforming acidic coiled coil protein-3|
|MAP (2,4,65c):||Microtubule associated protein (2,4,65c)|
|Cdk:||Cyclin dependent kinase|
|Plx1:||Polo like kinase-1|
|SPN2:||Septin like protein-2|
|KL1:||Katanin like protein1|
|LECT2:||Leukocyte cell derived chemotaxin2|
|bFGF:||Basic fibroblast growth factor|
|IGF1:||Insulin like growth factor1|
|LAPSER1:||Leucine zipper tumor suppressor protein1|
|ADNP:||Activity dependent neuroprotective protein|
|GCP (2,3):||Granulocyte chemotactic protein (2,3)|
|DGL1:||Dolichyl diphospho-oligosaccharide protein1.|
Conflict of Interests
The authors declare that they have no conflict of interests.
The authors thank the Indian Institute of Science Education and Research, Kolkata India for providing IISER-K fellowships and opportunity of study and research. They also thank Dr. Sankar Maiti, Assistant Professor in Department of Biological Sciences, Indian Institute of Science Education and Research, Kolkata (IISER-K), for his inspiring teaching which helped in preparation of this paper. Sincere thanks to the reviewers who critically reviewed and commented for improvement of this article.
- T. Frickey and A. N. Lupas, “Phylogenetic analysis of AAA proteins,” Journal of Structural Biology, vol. 146, no. 1-2, pp. 2–10, 2004.
- F. J. McNally and R. D. Vale, “Identification of katanin, an ATPase that severs and disassembles stable microtubules,” Cell, vol. 75, no. 3, pp. 419–429, 1993.
- N. Iwaya, Y. Kuwahara, Y. Fujiwara et al., “A common substrate recognition mode conserved between katanin p60 and VPS4 governs microtubule severing and membrane skeleton reorganization,” Journal of Biological Chemistry, vol. 285, no. 22, pp. 16822–16829, 2010.
- J. J. Hartman and R. D. Vale, “Microtubule disassembly by ATP-dependent oligomerization of the AAA enzyme katanin,” Science, vol. 286, no. 5440, pp. 782–785, 1999.
- N. Iwaya, K. Akiyama, N. Goda et al., “Effect of Ca2+ on the microtubule-severing enzyme p60-katanin. Insight into the substrate-dependent activation mechanism,” FEBS Journal, vol. 279, no. 7, pp. 1339–1352, 2012.
- K. P. McNally, O. A. Bazirgan, and F. J. McNally, “Two domains of p80 katanin regulate microtubule severing and spindle pole targeting by p60 katanin,” Journal of Cell Science, vol. 113, no. 9, pp. 1623–1633, 2000.
- J. J. Hartman, J. Mahr, K. McNally et al., “Katanin, a microtubule-severing protein, is a novel AAA ATPase that targets to the centrosome using a WD40-containing subunit,” Cell, vol. 93, no. 2, pp. 277–287, 1998.
- H. Mohrbach and I. M. Kulić, “Motor driven microtubule shape fluctuations: force from within the lattice,” Physical Review Letters, vol. 99, no. 21, Article ID 218102, 4 pages, 2007.
- M. Srayko, E. T. O'Toole, A. A. Hyman, and T. Müller-Reichert, “Katanin disrupts the microtubule lattice and increases polymer number in C. elegans meiosis,” Current Biology, vol. 16, no. 19, pp. 1944–1949, 2006.
- L. J. Davis, D. J. Odde, S. M. Block, and S. P. Gross, “The importance of lattice defects in katanin-mediated microtubule severing in vitro,” Biophysical Journal, vol. 82, no. 6, pp. 2916–2927, 2002.
- J. F. Allard, G. O. Wasteneys, and E. N. Cytrynbaum, “Mechanisms of self-organization of cortical microtubules in plants revealed by computational simulations,” Molecular Biology of the Cell, vol. 21, no. 2, pp. 278–286, 2010.
- P. W. Baas, A. Karabay, and L. Qiang, “Microtubules cut and run,” Trends in Cell Biology, vol. 15, no. 10, pp. 518–524, 2005.
- J. D. Díaz-Valencia, M. M. Morelli, M. Bailey, D. Zhang, D. J. Sharp, and J. L. Ross, “Drosophila katanin-60 depolymerizes and severs at microtubule defects,” Biophysical Journal, vol. 100, no. 10, pp. 2440–2449, 2011.
- E. M. Gusnowski and M. Srayko, “Visualization of dynein-dependent microtubule gliding at the cell cortex: implications for spindle positioning,” Journal of Cell Biology, vol. 194, no. 3, pp. 377–386, 2011.
- C. Lu, M. Srayko, and P. E. Mains, “The Caenorhabditis elegans microtubule-severing complex MEI-1/MEI-2 katanin interacts differently with two superficially redundant β-tubulin isotypes,” Molecular Biology of the Cell, vol. 15, no. 1, pp. 142–150, 2004.
- R. Liu, S. Woolner, J. E. Johndrow, D. Metzger, A. Flores, and S. M. Parkhurst, “Sisyphus, the Drosophila myosin XV homolog, traffics within filopodia transporting key sensory and adhesion cargos,” Development, vol. 135, no. 1, pp. 53–63, 2008.
- R. Wightman and S. R. Turner, “A novel mechanism important for the alignment of microtubules,” Plant Signaling and Behavior, vol. 3, no. 4, pp. 238–239, 2008.
- K. Ikegami and M. Setou, “Unique post-translational modifications in specialized microtubule architecture,” Cell Structure and Function, vol. 35, no. 1, pp. 15–22, 2010.
- N. Sharma, J. Bryant, D. Wloga et al., “Katanin regulates dynamics of microtubules and biogenesis of motile cilia,” Journal of Cell Biology, vol. 178, no. 6, pp. 1065–1079, 2007.
- H. Sudo and P. W. Baas, “Strategies for diminishing katanin-based loss of microtubules in tauopathic neurodegenerative diseases,” Human Molecular Genetics, vol. 20, no. 4, Article ID ddq521, pp. 763–778, 2011.
- H. Sudo and P. W. Baas, “Acetylation of microtubules influences their sensitivity to severing by katanin in neurons and fibroblasts,” Journal of Neuroscience, vol. 30, no. 21, pp. 7215–7226, 2010.
- S. H. Tindemans and B. M. Mulder, “Microtubule length distributions in the presence of protein-induced severing,” Physical Review E, vol. 81, no. 3, Article ID 031910, 2010.
- D. J. Odde, L. Ma, A. H. Briggs, A. DeMarco, and M. W. Kirschner, “Microtubule bending and breaking in living fibroblast cells,” Journal of Cell Science, vol. 112, no. 19, pp. 3283–3288, 1999.
- M. Furukawa, Y. J. He, C. Borchers, and Y. Xiong, “Targeting of protein ubiquitination by BTB-Cullin 3-Roc1 ubiquitin ligases,” Nature Cell Biology, vol. 5, no. 11, pp. 1001–1007, 2003.
- L. Pintard, J. H. Willis, A. Willems et al., “The BTB protein MEL-26 is a substrate-specific adaptor of the CUL-3 ubiquitin-ligase,” Nature, vol. 425, no. 6955, pp. 311–316, 2003.
- J. L. F. A. Johnson, C. Lu, E. Raharjo, K. McNally, F. J. McNally, and P. E. Mains, “Levels of the ubiquitin ligase substrate adaptor MEL-26 are inversely correlated with MEI-1/katanin microtubule-severing activity during both meiosis and mitosis,” Developmental Biology, vol. 330, no. 2, pp. 349–357, 2009.
- K. J. Wilson, H. Qadota, P. E. Mains, and G. M. Benian, “UNC-89 (obscurin) binds to MEL-26, a BTB-domain protein, and affects the function of MEI-1 (katanin) in striated muscle of Caenorhabditis elegans,” Molecular Biology of the Cell, vol. 23, no. 14, pp. 2623–2634, 2012.
- C. M. Cummings, C. A. Bentley, S. A. Perdue, P. W. Baas, and J. D. Singer, “The Cul3/Klhdc5 E3 ligase regulates p60/katanin and is required for normal mitosis in mammalian cells,” Journal of Biological Chemistry, vol. 284, no. 17, pp. 11663–11675, 2009.
- T. Kurz, L. Pintard, J. H. Willis et al., “Cytoskeletal regulation by the Nedd8 ubiquitin-like protein modification pathway,” Science, vol. 295, no. 5558, pp. 1294–1298, 2002.
- L. Pintard, T. Kurz, S. Glasser, J. H. Willis, M. Peter, and B. Bowerman, “Neddylation and deneddylation of CUL-3 is required to target MEI-1/Katanin for degradation at the meiosis-to-mitosis transition in C. elegans,” Current Biology, vol. 13, no. 11, pp. 911–921, 2003.
- S. Maddika and J. Chen, “Protein kinase DYRK2 is a scaffold that facilitates assembly of an E3 ligase,” Nature Cell Biology, vol. 11, no. 4, pp. 409–419, 2009.
- M. L. Stitzel, J. Pellettieri, and G. Seydoux, “The C. elegans DYRK kinase MBK-2 marks oocyte proteins for degradation in response to meiotic maturation,” Current Biology, vol. 16, no. 1, pp. 56–62, 2006.
- S. Quintin, P. E. Mains, A. Zinke, and A. A. Hyman, “The mbk-2 kinase is required for inactivation of MEI-1/katanin in the one-cell Caenorhabditis elegans embryo,” EMBO Reports, vol. 4, no. 12, pp. 1175–1181, 2003.
- C. Lu and P. E. Mains, “The C. elegans anaphase promoting complex and MBK-2/DYRK kinase act redundantly with CUL-3/MEL-26 ubiquitin ligase to degrade MEI-1 microtubule-severing activity after meiosis,” Developmental Biology, vol. 302, no. 2, pp. 438–447, 2007.
- K. Toyo-Oka, S. Sasaki, Y. Yano et al., “Recruitment of katanin p60 by phosphorylated NDEL1, an LIS1 interacting protein, is essential for mitotic cell division and neuronal migration,” Human Molecular Genetics, vol. 14, no. 21, pp. 3113–3128, 2005.
- K. Toyo-oka, D. Mori, Y. Yano et al., “Protein phosphatase 4 catalytic subunit regulates Cdk1 activity and microtubule organization via NDEL1 dephosphorylation,” Journal of Cell Biology, vol. 180, no. 6, pp. 1133–1147, 2008.
- D. Mori, Y. Yano, K. Toyo-Oka et al., “NDEL1 phosphorylation by Aurora-A kinase is essential for centrosomal maturation, separation, and TACC3 recruitment,” Molecular and Cellular Biology, vol. 27, no. 1, pp. 352–367, 2007.
- X. Han, J. E. Gomes, C. L. Birmingham, L. Pintard, A. Sugimoto, and P. E. Mains, “The role of protein phosphatase 4 in regulating microtubule severing in the Caenorhabditis elegans embryo,” Genetics, vol. 181, no. 3, pp. 933–943, 2009.
- R. Loughlin, J. D. Wilbur, F. J. McNally, F. J. Nédélec, and R. Heald, “Katanin contributes to interspecies spindle length scaling in Xenopus,” Cell, vol. 147, no. 6, pp. 1397–1407, 2011.
- K. P. McNally, D. Buster, and F. J. McNally, “Katanin-mediated microtubule severing can be regulated by multiple mechanisms,” Cell Motility and the Cytoskeleton, vol. 53, no. 4, pp. 337–349, 2002.
- W. Li, L. R. DeBella, T. Guven-Ozkan, R. Lin, and L. S. Rose, “An eIF4E-binding protein regulates katanin protein levels in C. elegans embryos,” Journal of Cell Biology, vol. 187, no. 1, pp. 33–42, 2009.
- K. McNally, A. Audhya, K. Oegema, and F. J. McNally, “Katanin controls mitotic and meiotic spindle length,” Journal of Cell Biology, vol. 175, no. 6, pp. 881–891, 2006.
- F. J. McNally and S. Thomas, “Katanin is responsible for the M-phase microtubulesevering activity in Xenopus eggs,” Molecular Biology of the Cell, vol. 9, no. 7, pp. 1847–1861, 1998.
- M. Srayko, D. W. Buster, O. A. Bazirgan, F. J. McNally, and P. E. Mains, “MEI-1/MEI-2 katanin-like microtubule severing activity is required for Caenorhabditis elegans meiosis,” Genes and Development, vol. 14, no. 9, pp. 1072–1084, 2000.
- K. P. McNally and F. J. McNally, “The spindle assembly function of Caenorhabditis elegans katanin does not require microtubule-severing activity,” Molecular Biology of the Cell, vol. 22, no. 9, pp. 1550–1560, 2011.
- H. Y. Yang, K. McNally, and F. J. McNally, “MEI-1/katanin is required for translocation of the meiosis I spindle to the oocyte cortex in C. elegans,” Developmental Biology, vol. 260, no. 1, pp. 245–259, 2003.
- D. Zhang, G. C. Rogers, D. W. Buster, and D. J. Sharp, “Three microtubule severing enzymes contribute to the "Pacman- flux" machinery that moves chromosomes,” Journal of Cell Biology, vol. 177, no. 2, pp. 231–242, 2007.
- D. Buster, K. McNally, and F. J. McNally, “Katanin inhibition prevents the redistribution of γ-tubulin at mitosis,” Journal of Cell Science, vol. 115, no. 5, pp. 1083–1092, 2002.
- M. Nakamura, D. W. Ehrhardt, and T. Hashimoto, “Microtubule and katanin-dependent dynamics of microtubule nucleation complexes in the acentrosomal Arabidopsis cortical array,” Nature Cell Biology, vol. 12, no. 11, pp. 1064–1070, 2010.
- T. M. Sonbuchner, U. Rath, and D. J. Sharp, “KL1 is a novel microtubule severing enzyme that regulates mitotic spindle architecture,” Cell Cycle, vol. 9, no. 12, pp. 2403–2411, 2010.
- L. O'Donnell, D. Rhodes, S. J. Smith et al., “An essential role for katanin p80 and microtubule severing in male gamete production,” PLoS Genetics,, vol. 8, no. 5, Article ID e1002698, 2012.
- L. B. Smith, L. Milne, N. Nelson et al., “KATNAL1 regulation of sertoli cell microtubule dynamics is essential for spermiogenesis and male fertility,” PLoS Genetics, vol. 8, no. 5, Article ID Article numbere1002697, 2012.
- A. Karabay, W. Yu, J. M. Solowska, D. H. Baird, and P. W. Baas, “Axonal growth is sensitive to the levels of katanin, a protein that severs microtubules,” Journal of Neuroscience, vol. 24, no. 25, pp. 5778–5788, 2004.
- F. J. Ahmad, W. Yu, F. J. McNally, and P. W. Baas, “An essential role for katanin in severing microtubules in the neuron,” Journal of Cell Biology, vol. 145, no. 2, pp. 305–315, 2000.
- R. Butler, J. D. Wood, J. A. Landers, and V. T. Cunliffe, “Genetic and chemical modulation of spastin-dependent axon outgrowth in zebrafish embryos indicates a role for impaired microtubule dynamics in hereditary spastic paraplegia,” Disease Models and Mechanisms, vol. 3, no. 11-12, pp. 743–751, 2010.
- Y. Koshimizu and M. Ohtomi, “Regulation of katanin-P60 levels by LECT2 adjusts microtubular morphology,” NeuroReport, vol. 21, no. 9, pp. 646–650, 2010.
- L. Qiang, W. Yu, M. Liu, J. M. Solowska, and P. W. Baas, “Basic fibroblast growth factor elicits formation of interstitial axonal branches via enhanced severing of microtubules,” Molecular Biology of the Cell, vol. 21, no. 2, pp. 334–344, 2010.
- L. Qiang, W. Yu, A. Andreadis, M. Luo, and P. W. Baas, “Tau protects microtubules in the axon from severing by Katanin,” Journal of Neuroscience, vol. 26, no. 12, pp. 3120–3129, 2006.
- W. Yu, L. Qiang, J. M. Solowska, A. Karabay, S. Korulu, and P. W. Baas, “The microtubule-severing proteins spastin and katanin participate differently in the formation of axonal branches,” Molecular Biology of the Cell, vol. 19, no. 4, pp. 1485–1498, 2008.
- S. Korulu and A. Karabay, “IGF-1 participates differently in regulation of severing activity of katanin and spastin,” Cellular and Molecular Neurobiology, vol. 31, no. 4, pp. 497–501, 2011.
- W. Yu, J. M. Solowska, L. Qiang, A. Karabay, D. Baird, and P. W. Baas, “Regulation of microtubule severing by katanin subunits during neuronal development,” Journal of Neuroscience, vol. 25, no. 23, pp. 5573–5583, 2005.
- H. H. Lee, L. Y. Jan, and Y. N. Jan, “Drosophila IKK-related kinase Ik2 and Katanin p60-like 1 regulate dendrite pruning of sensory neuron during metamorphosis,” Proceedings of the National Academy of Sciences of the United States of America, vol. 106, no. 15, pp. 6363–6368, 2009.
- A. Stewart, A. Tsubouchi, M. M. Rolls, W. Daniel Tracey, and N. Tang Sherwood, “Katanin p60-like1 promotes microtubule growth and terminal dendrite stability in the larval class IV sensory neurons of Drosophila,” Journal of Neuroscience, vol. 32, no. 34, pp. 11631–11642, 2012.
- X. Ye, Y. C. Lee, M. Choueiri et al., “Aberrant expression of katanin p60 in prostate cancer bone metastasis,” Prostate, vol. 72, no. 3, pp. 291–300, 2012.
- X. N. Li, Y. L. Li, G. B. Liu, and Y. Q. Ding, “Selection of choriocarcinoma-associated genes using bioinformatics,” Di Yi Jun Yi Da Xue Xue Bao, vol. 25, no. 1, pp. 1–6, 2005.
- D. Zhang, K. D. Grode, S. F. Stewman et al., “Drosophila katanin is a microtubule depolymerase that regulates cortical-microtubule plus-end interactions and cell migration,” Nature Cell Biology, vol. 13, no. 4, pp. 361–372, 2011.
- H. Sudo and Y. Maru, “LAPSER1 is a putative cytokinetic tumor suppressor that shows the same centrosome and midbody subcellular localization pattern as p80 katanin,” FASEB Journal, vol. 21, no. 9, pp. 2086–2100, 2007.
- H. Sudo and Y. Maru, “LAPSER1/LZTS2: a pluripotent tumor suppressor linked to the inhibition of katanin-mediated microtubule severing,” Human Molecular Genetics, vol. 17, no. 16, pp. 2524–2540, 2008.
- I. Gozes, “NAP (davunetide) provides functional and structural neuroprotection,” Current Pharmaceutical Design, vol. 17, no. 10, pp. 1040–1044, 2011.
- J. M. Solowska, G. Morfini, A. Falnikar et al., “Quantitative and functional analyses of spastin in the nervous system: implications for hereditary spastic paraplegia,” Journal of Neuroscience, vol. 28, no. 9, pp. 2147–2157, 2008.
- R. D. Emes and C. P. Ponting, “A new sequence motif linking lissencephaly, Treacher Collins and oral-facial-digital type 1 syndromes, microtubule dynamics and cell migration,” Human Molecular Genetics, vol. 10, no. 24, pp. 2813–2820, 2001.
- E. Panteris, I. D. S. Adamakis, G. Voulgari, and G. Papadopoulou, “A role for katanin in plant cell division: microtubule organization in dividing root cells of fra2 and lue1Arabidopsis thaliana mutants,” Cytoskeleton, vol. 68, no. 7, pp. 401–413, 2011.
- K. Soga, A. Yamaguchi, T. Kotake, K. Wakabayashi, and T. Hoson, “1-Aminocyclopropane-1-carboxylic acid (ACC)-induced reorientation of cortical microtubules is accompanied by a transient increase in the transcript levels of γ-tubulin complex and katanin genes in azuki bean epicotyls,” Journal of Plant Physiology, vol. 167, no. 14, pp. 1165–1171, 2010.
- V. Stoppin-Mellet, J. Gaillard, and M. Vantard, “Katanin's severing activity favors bundling of cortical microtubules in plants,” Plant Journal, vol. 46, no. 6, pp. 1009–1017, 2006.
- Q. Meng, J. Du, J. Li et al., “Tobacco microtubule-associated protein, MAP65-1c, bundles and stabilizes microtubules,” Plant Molecular Biology, vol. 74, no. 6, pp. 537–547, 2010.
- M. Uyttewaal, A. Burian, K. Alim et al., “Mechanical stress acts via katanin to amplify differences in growth rate between adjacent cells in Arabidopsis,” Cell, vol. 149, no. 2, pp. 439–451, 2012.
- O. Keech, E. Pesquet, L. Gutierrez et al., “Leaf senescence is accompanied by an early disruption of the microtubule network in Arabidopsis,” Plant Physiology, vol. 154, no. 4, pp. 1710–1720, 2010.
- T. Bouquin, O. Mattsson, H. Næsted, R. Foster, and J. Mundy, “The Arabidopsis lue1 mutant defines a katanin p60 ortholog involved in hormonal control of microtubule orientation during cell growth,” Journal of Cell Science, vol. 116, no. 5, pp. 791–801, 2003.
- D. H. Burk, B. Liu, R. Zhong, W. H. Morrison, and Z. H. Ye, “A katanin-like protein regulates normal cell wall biosynthesis and cell elongation,” Plant Cell, vol. 13, no. 4, pp. 807–827, 2001.
- M. Komorison, M. Ueguchi-Tanaka, I. Aichi et al., “Analysis of the rice mutant dwarf and gladius leaf 1. Aberrant katanin-mediated microtubule organization causes up-regulation of gibberellin biosynthetic genes independently of gibberellin signaling,” Plant Physiology, vol. 138, no. 4, pp. 1982–1993, 2005.
- J. Qu, J. Ye, Y. F. Geng, et al., “Dissecting functions of KTN and WRI1 in cotton fiber development by virus-induced gene silencing,” Plant Physiology. In press.
- M. Webb, S. Jouannic, J. Foreman, P. Linstead, and L. Dolan, “Cell specification in the Arabidopsis root epidermis requires the activity of ectopic root hair 3—a katanin-p60 protein,” Development, vol. 129, no. 1, pp. 123–131, 2002.
- M. Casanova, L. Crobu, C. Blaineau, N. Bourgeois, P. Bastien, and M. Pagès, “Microtubule-severing proteins are involved in flagellar length control and mitosis in Trypanosomatids,” Molecular Microbiology, vol. 71, no. 6, pp. 1353–1370, 2009.
- M. Q. Rasi, J. D. K. Parker, J. L. Feldman, W. F. Marshall, and L. M. Quarmby, “Katanin knockdown supports a role for microtubule severing in release of basal bodies before mitosis in Chlamydomonas,” Molecular Biology of the Cell, vol. 20, no. 1, pp. 379–388, 2009.
- T. A. Lohret, L. Zhao, and L. M. Quarmby, “Cloning of Chlamydomonas p60 katanin and localization to the site of outer doublet severing during deflagellation,” Cell Motility Cytoskeleton, vol. 43, no. 3, pp. 221–231, 1999.
- E. E. Dymek, P. A. Lefebvre, and E. F. Smith, “PF15p is the Chlamydomonas homologue of the katanin p80 subunit and is required for assembly of flagellar central microtubules,” Eukaryotic Cell, vol. 3, no. 4, pp. 870–879, 2004.
- C. Benz, C. Clucas, J. C. Mottram, and T. C. Hammarton, “Cytokinesis in bloodstream stage Trypanosoma brucei requires a family of katanins and spastin,” PLoS One, vol. 7, no. 1, Article ID e30367, 2012.