Research Article
Complete Mitogenomes of Euploea mulciber (Nymphalidae: Danainae) and Libythea celtis (Nymphalidae: Libytheinae) and Their Phylogenetic Implications
Table 4
Codon usage of the protein-coding genes of the Libythea celtis and Euploea mulciber mitogenomes.
| Codon | (RSCU) |
| UUU(F) | 360 (1.88)/346 (1.89) | UUC(F) | 23 (0.12)/21 (0.11) | UUA(L) | 489 (5.37)/483 (5.35) | UUG(L) | 5 (0.05)/8 (0.09) | CUU(L) | 35 (0.38)/34 (0.38) | CUC(L) | 1 (0.01)/3 (0.03) | CUA(L) | 16 (0.18)/14 (0.15) | CUG(L) | 0 (0)/0 (0) | AUU(I) | 425 (1.95)/436 (1.91) | AUC(I) | 11 (0.05)/21 (0.09) | AUA(M) | 276 (1.94)/287 (1.93) | AUG(M) | 9 (0.06)/10 (0.07) | GUU(V) | 69 (1.99)/63 (1.98) | GUC(V) | 2 (0.06)/1 (0.03) | GUA(V) | 65 (1.87)/62 (1.95) | GUG(V) | 3 (0.09)/1 (0.03) | UCU(S) | 120 (2.94)/97 (2.45) | UCC(S) | 7 (0.17)/8 (0.2) | UCA(S) | 83 (2.03)/94 (2.37) | UCG(S) | 1 (0.02)/5 (0.13) | CCU(P) | 73 (2.39)/77 (2.52) | CCC(P) | 9 (0.3)/10 (0.33) | CCA(P) | 39 (1.28)/35 (1.15) | CCG(P) | 1 (0.03)/0 (0) | ACU(T) | 84 (2.15)/92 (2.36) | ACC(T) | 2 (0.05)/7 (0.18) | ACA(T) | 70 (1.79)/53 (1.36) | ACG(T) | 0 (0)/4 (0.1) | GCU(A) | 70 (2.28)/75 (2.36) | GCC(A) | 6 (0.2)/1 (0.03) | GCA(A) | 46 (1.5)/49 (1.54) | GCG(A) | 1 (0.03)/2 (0.06) | UAU(Y) | 173 (1.9)/18 (1.94) | UAC(Y) | 9 (0.1)/6 (0.06) | UAA(*) | 0 (0)/0 (0) | UAG(*) | 0 (0)/0 (0) | CAU(H) | 59 (1.79)/60 (1.79) | CAC(H) | 7 (0.21)/7 (0.21) | CAA(Q) | 61 (1.91)/56 (1.9) | CAG(Q) | 3 (0.09)/3 (0.1) | AAU(N) | 250 (1.91)/24 (1.91) | AAC(N) | 12 (0.09)/11 (0.09) | AAA(K) | 93 (1.81)/99 (1.96) | AAG(K) | 10 (0.19)/2 (0.04) | GAU(D) | 69 (1.97)/58 (1.9) | GAC(D) | 1 (0.03)/3 (0.1) | GAA(E) | 60 (1.76)/68 (1.89) | GAG(E) | 8 (0.24)/4 (0.11) | UGU(C) | 26 (1.73)/28 (1.65) | UGC(C) | 4 (0.27)/6 (0.35) | UGA(W) | 93 (1.96)/92 (1.98) | UGG(W) | 2 (0.04)/1 (0.02) | CGU(R) | 10 (0.77)/14 (1.1) | CGC(R) | 1 (0.08)/1 (0.08) | CGA(R) | 39 (3)/36 (2.82) | CGG(R) | 2 (0.15)/0 (0) | AGU(S) | 32 (0.78)/29 (0.73) | AGC(S) | 3 (0.07)/2 (0.05) | AGA(S) | 81 (1.98)/81 (2.04) | AGG(S) | 0 (0)/1 (0.03) | GGU(G) | 50 (1)/55 (1.13) | GGC(G) | 0 (0)/2 (0.04) | GGA(G) | 126 (2.52)/120 (2.47) | GGG(G) | 24 (0.48)/17 (0.35) |
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: frequency of codon used; RSCU: relative synonymous codon usage; *stop codon. Start codons and stop codons were excluded in total codon counts.
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