Research Article

AtTRB1–3 Mediates Structural Changes in AtPOT1b to Hold ssDNA

Table 10

Interacting residues in AtPOT1b-ssDNA complex after AtTRB1–3 interaction.

TRB1 induced AtPOT1b-ssDNA
complex
Hydrogen bond
distance ( )
TRB2 induced AtPOT1b-ssDNA
complex
Hydrogen bond
distance (Å)
TRB3 induced AtPOT1b-ssDNA
complex
Hydrogen bond
distance (Å)

A: ASN38—B: GUA132.39587A: ARG5—B: THY222.17131A: TYR9—B: THY222.13605
A: SER40—B: GUA142.43532A: TYR9—B: GUA211.94455A: ASN38—B: GUA132.11417
: ARG68—B: GUA191.97906A: ASN38—B: GUA131.97456A: SER40—B: GUA142.2216
A: ASP69—B: GUA191.88579 : ARG68—B: GUA202.12744A: THR66—B: GUA202.16437
A: ASP69—B: GUA191.89414 : ARG68—B: GUA192.06734 : ARG68—B: GUA202.49033
A: ASP69—B: GUA202.45312A: ASP69—B: GUA191.85794A: THR102— B: GUA202.07601
A: SER83—B: GUA212.06883A: ASP69—B: GUA191.99529 : SER103—B: GUA202.05256
: SER103—B: GUA192.15165A: ASP69—B: GUA202.42681 : SER103—B: GUA202.20493
: SER105—B: GUA202.05209A: SER83—B: GUA211.88724 : SER105—B: GUA211.98223
A: PHE106—B: GUA202.30426A: ARG84—B: GUA202.03824 : LYS125— B: THY231.89716
: LYS125—B: THY221.97765 : SER103—B: GUA192.28571 : LYS125—B: THY232.31399
: LYS125—B: THY232.05149 : SER103—B: GUA192.06968A: LYS222—B: GUA132.02673
A: ARG221—B: GUA132.05103A: SER104—B: GUA192.39027A: LYS222—B: GUA141.99453
A: ARG221—B: GUA142.40091 : SER105—B: GUA201.9841A: LYS253—B: GUA121.96959
A: ARG221—B: GUA132.21705A: SER122—B: GUA202.32017
A: LYS222—B: GUA131.98407 : LYS125—B: THY222.46342
A: LYS222—B: GUA122.17891 : LYS125—B: THY221.99174
A: LYS222—B: GUA122.37057 : LYS125—B: THY231.85834
A: HIS251—B: ADE112.011A: LEU127—B: GUA212.32284
A: LYS253—B: GUA122.06171A: LYS222—B: GUA132.1696
A: LYS253—B: ADE112.0826A: LYS222—B: GUA122.11884
A: HIS251—B: GUA122.13834
A: LYS253—B: GUA122.26627
A: LYS253—B: ADE112.08118

Bold represents the residues involved in Telo_bind domain while * represents the common amino acids involved in all three complexes.