Research Article
AtTRB1–3 Mediates Structural Changes in AtPOT1b to Hold ssDNA
Table 2
Physicochemical properties of concerned protein analysed through ProtParam.
| Property UniProt ID | AtPOT1b (Q6NKX5) | AtTRB1 (Q8VWK4) | AtTRB2 (Q9FJW5) | AtTRB3 (Q9M2X3) |
| Number of amino acids | 454 | 300 | 299 | 295 | Total number of atoms | 7376 | 4651 | 4685 | 4570 | Molecular weight (kDa) | 52.57 | 33.02 | 33.01 | 32.24 | Theoretical pI | 8.38 | 9.34 | 9.87 | 9.52 | Maximum % of residue | Leucine (9) Serine (7.9) Arg (6.8) | Alanine (12) Glu (9) Serine (8.7) | Alanine (13.4) Lysine (10.7) Glu (8) | Alanine (12.5) Lysine (10.5) Glu (8.5) | Minimum % of residue | Tryptophan (2) |
Cystein (1) | Cystein (0.3) | Cystein (0.3) | Total number of negatively charged residues (Asp + Glu) | 55 | 38 | 35 | 36 | Total number of positively charged residues (Arg + Lys) | 60 | 47 | 52 | 47 | Instability index | 48.95 | 49.21 | 32.12 | 43.04 | Aliphatic index | 85.84 | 72 | 72.98 | 74.88 | Ext. coefficient (with Cys) | 68380 | 29575 | 31970 | 30940 | Ext. coefficient (without Cys) | 67380 | 29450 | 31970 | 30940 | Grand average of hydropathicity (GRAVY) | −0.215 | −0.623 | −0.623 | −0.558 |
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