The Activation-Relaxation Technique: ART Nouveau and Kinetic ART

Figure 3

Evolution of trajectory #18 (a), #32 (b), #35 (c), and #25 (d). Top graphs: formation of the helical regions H1 (green), H2 (blue), and H3 (magenta) into helices and evolution of the energy level (red). The blue box of (d) indicates that a lower temperature criterion was used for that part of the simulation. All lines are smoothed by a Gaussian of width 𝜎=0.1 (reproduced from [38]).

(a)

(b)

(c)

(d)