Relative Movements of Domains in Large Molecules of the Immune System

Figure 3

Domains CD8 and MHC with local eigenvectors. Domain CD8 is shown in cyan, in purple, and the remaining parts of the MHC as well as the TCR (labelled “protein”) in black. Eigenvectors (, , and , , , resp.) are shown for the first frame of the trajectory and colored (, : blue, , : red, , : yellow) for each of the domains.