Biodiversity, Antimicrobial Potential, and Phylogenetic Placement of an Endophytic Fusarium oxysporum NFX 06 Isolated from Nothapodytes foetida

Table 5

List of F. oxysporum strains used in this study and their GenBank accession numbers.

Species	No. of base pairs	Source/host	Country	Genbank accession no.
Endophytic isolates
Fusarium oxysporum NFX06	510 bp	Nothapodytes foetida	India	KC914432*
F. oxysporum AC30	594 bp	Acorus calamus	India	GU056168
F. oxysporum f. sp. gladioli UAS007	528 bp	Nothapodytes nimmoniana	India	FJ158124.1
F. oxysporum JRE 1	497 bp	Juniperus recurva	India	EF591767.1
F. oxysporum D 16	517 bp	Annona squamosa	China	EF488410.1
F. oxysporum D 17	510 bp	Annona squamosa	China	EF488411.1
F. oxysporum	543 bp	Scuticaria irwiniana	Brazil	FJ605247.1
F. oxysporum  UFMGCB 1376	543 bp	Acianthera teres	Brazil	FJ605244.1
F. oxysporum F35	515 bp	Taxus cuspidata	South Korea	AY555719.1
F. oxysporum DC-1-67	493 bp	Dracaena cambodiana	China	FJ449900.1
F. oxysporum EYR11	549 bp	Pinus massoniana	China	EU888922
F. oxysporum FuO139	561 bp	Schlumbergera truncata	Italy	KC196121
F. oxysporum CMT6	527 bp	Phaseolus vulgaris	Brazil	JQ754006
F. oxysporum	545 bp	Paris polyphylla var. chinensis	China	JF776163
F. oxysporum DB0612101	515 bp	—	—	HQ682196
F. oxysporum SFCF20120912-05	548 bp	Pinus thunbergii	Korea	KF313101.1
F. oxysporum REF213	555 bp	Ephedra distachya	Hungary	JN859433
F. oxysporum DH-42	581 bp	Rehmannia glutinosa	China	HM346538.1
F. oxysporum JJ002	541 bp	Ginkgo biloba	China	DQ166550
F. oxysporum FOFB62	564 bp	Grevillea robusta	Kenya	HQ651161
F. oxysporum Aug021	543 bp	Pecteilis susannae (L.)  Rafin	Thailand	GQ862347
Pathogenic Isolates
F. oxysporum 18P	487 bp	Bean	Mexico	FJ619940
F. oxysporum f. cubense 115HT	569 bp	Banana	India	DQ889176.1
F. oxysporum GXF-6	544 bp	Hybrid bamboo	China	EU285554.1
F. oxysporum 544	544 bp	Bupleurum chinensis	China	EU862240
F. oxysporum 6𝑒−35	515 bp	Capsicum annum	Mexico	AY728210
F. oxysporum nazar 1	545 bp	Agave tequilana	Mexico	EU161243
F. oxysporum f. sp. niveum 1ZF1	545 bp	Watermelon	China	EU588397
F. oxysporum f. sp. lilli FF-2	543 bp	Lily	Taiwan	AY684919
F. oxysporum f.sp. vasinfectum F1TP0001	542 bp	Tulip	Mexico	DQ979010
F. oxysporum f. sp. vasinfectum	545 bp	Cotton	China	EU849584
F. oxysporum R1	543 bp	Atractylodes	China	JX885462
F. oxysporum 857	564 bp	Macrocephala	China	JN232190
F. oxysporum GLB3	567 bp	—	China	GU136492
F. oxysporum 08YSJG	567 bp	—	China	GU136493
F. oxysporum	527 bp	Pinus sylvestris	Sweden	HM036595
F. oxysporum	564 bp	Grevillea robusta	—	HQ651161
F. oxysporum	552 bp	—	UK	AY147369
F. oxysporum XSD-73	570 bp	Dioscorea collettii var. hypoglauca	China	EU326215
F. oxysporum XSD-78	571 bp	Polygonatum sibirilum red	China	EU326216
F. oxysporum OT0330	546 bp	Roots of willows	—	GU934524

∗Endophytic fungus used in the present study.