Research Article
Structural Properties of G,T-Parallel Duplexes
Table 1
Sequences of the G,T-parallel clamps, control oligonucleotides, and their targets.
| No. | Type | Sequence |
| 1 | Parallel clamp | -GTTGGTGGTGT--AGAGGAGGAAG- | 2 | Target 1 | -TCTCCTCCTTC- | 3 | Complementary to 2 | -AGAGGAGGAAG- | 4 | Parallel clamp | -TGTGGTGGTTG--(EG)6--GAAGGAGGAGA- | 5 | Parallel clamp | -TGTGGTGGTTG--(EG)6--GAAGGANGGANGA- | 6 | Parallel clamp | -TGTGGTGGTTG--(EG)6--GANANGGANGGANGA- | 7 | Parallel clamp | -TGTGGTGGTTG--(EG)6--GAAGNAGGNAGA- | 8 | Target 2 | -CTTCCTCCTCT- | 9 | Control | -GGTTGGTTGGT--(EG)6--GAAGGANGGANGA- | 10 | Complementary to 8 | -GAAGGAGGAGA- | 11 | -OMe-RNA target 2 | -CUUCCUCCUCU- |
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AN = 8-aminoadenine, G N = 8-aminoguanine, -(EG)6 = hexaethyleneglycol, C,U = -O-methyl-RNA.
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