A Genomic Approach to Study Anthocyanin Synthesis and Flower Pigmentation in Passionflowers
Table 1
Putative Passiflora homologs of genes encoding elements of the anthocyanin biosynthetic pathway.
Enzyme
Passiflora AS*
First BLAST hit
-value
ID/SM
CHS
PACEPE3010G11.g
ABD24222 CHS Populus alba
85/90
PACEPE3014B06.g
ABC86919 CHS Populus alba
77/84
PACEPE3007G06.g
XP_002305446 CHS-like Populus trichocarpa
84/92
PACEPE3023H10.g
XP_002326830 CHS-like Populus trichocarpa
82/91
PACEPS7017D03.g
AAQ62589 CHS3 Glycine Max
82/88
DFR
PACEPE3003G04.g
XP_002307667 DFR2 Populus trichocarpa
82/94
GT
PACEPE3030G03.g
XP_002532899 UFGT Ricinus communis
53/70
PACEPS7021H07.g
XP_002518725 UFGT Ricinus communis
56/72
GST
PACEPE3013H01.g
AF048978 GST Glycine Max
79/90
PACEPE3007A05.g
XM_002519342 GST theta Ricinus communis
77/89
PACEPE3018F08.g
ADB11335 GSTF7 phi Populus trichocarpa
68/83
PACEPS4006H06.g
ADB11332 GSTF4 phi Populus trichocarpa
63/78
PACEPS7023B03.g
AF243378 GST 23 Glycine max
80/88
MYB
PACEPS7022E07.g
XP_002530824 R2R3 MYB Ricinus communis
88/91
WD40
PACEPE3007G07.g
XP_002512788 WD-repeat protein Ricinus communis
92/96
Abbreviations: CHS: chalcone synthase; DFR: dihydroflavonol 4-reductase; GT: glucosyltransferase and GST: glutathione S-transferase. Using the BLASTp algorithm [29].
*AS: assembled sequence. Codes refer to the longest cDNA clone. PACEPE: Passiflora edulis; PACEPS: Passiflora suberosa. ID/SM: identity/similarity (both based on the amino acid sequence) with the first BLAST hit.