The Stability of a Model Substrate for Topoisomerase 1-Mediated DNA Religation Depends on the Presence of Mismatched Base Pairs

Table 3

Clustering of simulations via different measures.

Measure/Sequence	Matched	G-T	G-dU	G-FdU
RMSF	1	1	2	2
Covariance matrix	1	1	2	3
Cluster population	1	2	3	2

Cluster number for each simulation for each measure.