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| Attribute | Description of the attribute in relation to the control or candidate sequence |
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| chromLen/position | The ratio of the length of the chromosome over the position on that chromosome |
| ShannonEntropyNorm | Shannon entropy normalized to the sequence length |
| G% | Percentage of G base composition |
| C% | Percentage of C base composition |
| T% | Percentage of T base composition |
| A% | Percentage of A base composition |
| DuplexEnergy | The duplex energy between the miRNAs:miRNAs* |
| DuplexEnergyNorm | The duplex energy normalized to the length of the duplex structure |
| MaxMismatch | Maximum number of mismatches in the duplex structure based on both sides of the structure |
| minMatchPercent | Minimum % match based on length of the duplex structure both sides of the structure |
| DeltaG | Minimum free energy for the stem loop |
| DeltaGnorm | Minimum free energy normalized to the length of the stem loop |
| longestDotSet | Longest run of mismatches in the stem loop |
| longestBracketSet | Longest run of matches in the stem loop |
| loopCountNorm | Number of loop heads normalized to the length of the stem loop |
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